| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal_4345 |
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| Symbol | |
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| ID | 4841476 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS155 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009052 |
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| Strand | - |
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| Start bp | 5082674 |
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| End bp | 5085436 |
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| Gene Length | 2763 bp |
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| Protein Length | 920 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 640121623 |
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| Product | HsdR family type I site-specific deoxyribonuclease |
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| Protein accession | YP_001052675 |
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| Protein GI | 126176526 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0610] Type I site-specific restriction-modification system, R (restriction) subunit and related helicases |
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| TIGRFAM ID | [TIGR00348] type I site-specific deoxyribonuclease, HsdR family |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGATGA CAGAAGATAC TCTGGTTCAA CAAGTAACAG CCGATTACTT ATTAAATGAA
TTACAGTGGG ATGCCTCTGT CATGGGCATG TATGAGCGTT TAGGCAAAGA AGGGGACTTT
GGGCGAGAGT CCGAGAAGGA CGTTATTCTT ACCCGATACT TAGGTGAGAA GCTGATAGCG
TTGAACCCCG GTTTGCCTGA AGTTGTCTAC CAAGAGGCAC TTCGTCTTGT CTGCGAAATG
CCGTCTTCAA CCAATATTCT TGCTGTTAAT AAAGAAAAAT ATTCGTTGCA CAAAAATGGG
GTGGAAGTCA GCTACCTCAA TGATAAAGGT GATCGGGTAA AGAAGCGTCT TCGTCTTTTC
GATTTTGATA ATTATGAAAA CAATCACTTT TTATTAGTGC GTGAGTTTTG GGTAAAGGGT
GACATTTATC GTCGCAGAGC TGATTTGGTT GGATTTGTGA ATGGAATTCC GCTGCTGTTT
ATGGAAGTGA AAAACGTTCA CAAGGATATT AGGGCTGCCT ACGAACAAAA CCTCGCCGAT
TACAAAGACA CTATTCCGCA TCTGTTTTAT CACAATGCTT TTATCATTTT GGGAAATGGC
ATTGACGCCA AGATTGGATC TGTCTCCAGC AAATTTGAGC ATTTTAATGA CTGGAAGCGA
TTAAAAGAGA ATGAGCTTGG TGTTGTGGAT ATGGAAACCT TGCTGAAAGG AACCTGCTCC
AAAACCAATC TAATGGATAT CTTTGAAAAT TTTACCTTGT TCGACCAAAG TTCTGGACGG
CTAGTGAAAA TTGTTGCGCG TAATCATCAG TATCTTGGTG TCGGTCGAGC AATAGATGCT
GTTATCAATC GTGGTGAACG CTTGGGTAAA TTGGGTGTGT TTTGGCATAC CCAAGGTTCA
GGGAAATCTT ATTCAATCGT ATTTTTTGCG CAGATGGTGC ATCGAAAGTT GGGGGGGAAT
TATACCTTTG TAGTGCTGAC TGATCGGGAA GATCTCGATA CGCAGATTTA TAAAACTTTC
GCAGGAAGTG GAGTCGTCGA CAATGATAAA GACCCATGCC GTGCCGATAG TGGTAAAACC
CTTAAAGAAC TAATAGGCCA GCAGAAAGCT TTTGTTTTCA CCTTGATTCA AAAATTTAAT
GAAAAGGTAG ATCCTTTAAA GCCTTATTCT GAACGCGATG ACATTATTGT TATTACCGAC
GAGGCTCACC GTACACAGTA CGGAACTTTG TCTCTAAATA TGCGTAATGC TCTGCCTAAT
GCCAGCTTTA TCGGCTTTAC AGGCACTCCA TTATTCAAAG ATGACGAGAT AACCAAGAAG
GTATTCGGTG ATTATGTTTC CACCTATGAT TTTCAACGTG CAGTTGAAGA TAAAGCAACG
GTACCTTTGT ATTACGATGC TCGTGGCGAA GAATTAATAT TTACTGATGA GGATGGTAAC
GAGCATACAG TCGCTGACCC CAAAGGAATT AATGAGCGCA TAGCAGAAAA ACTTGAAGAG
CTAGAAATTG ATGATGTGGA TGTACAACAA CGGTTAGAGC GTGAGCTTAA ACGCGACTAC
CACATCATTA CTTCAACCAG TAGGCTTGAT CAGATTGCTC AAGATTTTGT TGCCCATTAT
GCCAATGGTT GGGAAACGGG CAAGGCCATG TTTGTTTGCC TTGATAAAAT CACCTGTGTA
CGAATGCACA AACTGATAGG TTTTTATTGG CAGCAAGAAG TTAAAGCAAA AGAGAGAGAG
CTTTCATCGG CCGCTGATGA GCAAGATTTA GCTTGGCGAG AACGACAATT GGCGTGGATG
AAAGAAACGC TTATGGCCGT TGTGGTTAGT GAGGAACAAG GCGAGGTTGC GAAGTTTGAA
AAGTGGGACT TGGATATTAG GCCGTATCGC CTGCTCATTA AAACTGGTTT TGAGTTACAG
GATGGTTCGC GTTTGGATAT GGAAGAGGCG TTTAAGTCTA GCGAACACCC TTTCAGGGTA
GCGATTGTTT GTGCCATGTG GTTAACGGGC TTTGATGTAC CAACACTCTC CACTCTGTAT
TTAGACAAAC CCCTTAAGGC GCATACTTTA ATGCAGGCCA TTGCTAGGGC AAATCGTGTG
GCGGAAGGCA AAAATAATGG ACTGATTGTC GATTACAGCG GCATACTCAA AAATCTACGT
AAAGCGCTGG CAACATTTGC TGGTGCGGGT GACGAAGGCC ATGGTGGTGA GGAAGGTGAA
AGTGAACCCG CTAAGCCCAA TGAGGAACTT TTAGAAAGCC TGAATGAGTC GATTAGTTTT
GCCGCTGAGT TTTTACGAAA GCACGATTTT GAATTGAGTC GAATTATCAC CGAAACTGGA
TTTGCCAAGA ACTCGGCGAT TGCACAGGCC AAAGAAGTCA TCAATATAAA TGATGAAACC
AGAAAACGAT TTGAGGTGAT CGCCAGAGAG GTATTTAACA AATTCAAGGC TTGTATTAAC
GTGCCGGGTA TTAATAAATA TCGTGATCTG CGTGATGCTA TTAATGTGCT CTATAAGAGT
TTGCAGGCCG ATAAAGAGAA AGCTGATATT TCCGATATCA TGAAAGAGTT GTATGAAATC
GTTGACGGTA GTATAGACAC TACATATAAA ATCAAAGAGC CAAAACCGGA TAACGAGCGA
ATTTACGATA TCAGTAAGAT CGATTTTGAA CGTTTGCGTC AGGAGTTTGC AAAATCAGAG
CGAAAAAACA CAACTGTGCA GTCTCTGAAG CATGCTGTTG AGAATAAACT TGCTCGCTTA
TAG
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| Protein sequence | MAMTEDTLVQ QVTADYLLNE LQWDASVMGM YERLGKEGDF GRESEKDVIL TRYLGEKLIA
LNPGLPEVVY QEALRLVCEM PSSTNILAVN KEKYSLHKNG VEVSYLNDKG DRVKKRLRLF
DFDNYENNHF LLVREFWVKG DIYRRRADLV GFVNGIPLLF MEVKNVHKDI RAAYEQNLAD
YKDTIPHLFY HNAFIILGNG IDAKIGSVSS KFEHFNDWKR LKENELGVVD METLLKGTCS
KTNLMDIFEN FTLFDQSSGR LVKIVARNHQ YLGVGRAIDA VINRGERLGK LGVFWHTQGS
GKSYSIVFFA QMVHRKLGGN YTFVVLTDRE DLDTQIYKTF AGSGVVDNDK DPCRADSGKT
LKELIGQQKA FVFTLIQKFN EKVDPLKPYS ERDDIIVITD EAHRTQYGTL SLNMRNALPN
ASFIGFTGTP LFKDDEITKK VFGDYVSTYD FQRAVEDKAT VPLYYDARGE ELIFTDEDGN
EHTVADPKGI NERIAEKLEE LEIDDVDVQQ RLERELKRDY HIITSTSRLD QIAQDFVAHY
ANGWETGKAM FVCLDKITCV RMHKLIGFYW QQEVKAKERE LSSAADEQDL AWRERQLAWM
KETLMAVVVS EEQGEVAKFE KWDLDIRPYR LLIKTGFELQ DGSRLDMEEA FKSSEHPFRV
AIVCAMWLTG FDVPTLSTLY LDKPLKAHTL MQAIARANRV AEGKNNGLIV DYSGILKNLR
KALATFAGAG DEGHGGEEGE SEPAKPNEEL LESLNESISF AAEFLRKHDF ELSRIITETG
FAKNSAIAQA KEVININDET RKRFEVIARE VFNKFKACIN VPGINKYRDL RDAINVLYKS
LQADKEKADI SDIMKELYEI VDGSIDTTYK IKEPKPDNER IYDISKIDFE RLRQEFAKSE
RKNTTVQSLK HAVENKLARL
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