Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal_4298 |
Symbol | |
ID | 4841960 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS155 |
Kingdom | Bacteria |
Replicon accession | NC_009052 |
Strand | - |
Start bp | 5032795 |
End bp | 5034039 |
Gene Length | 1245 bp |
Protein Length | 414 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 640121576 |
Product | major facilitator transporter |
Protein accession | YP_001052632 |
Protein GI | 126176483 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | [TIGR00890] Oxalate/Formate Antiporter |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.000777962 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTAAAG AGATGAACCG TACTCGGTAC CTGACCTTAG TTGGTACTAT TATCACCCAG TTTGCACTCG GCTCAGTTTA CACTTGGAGC CTGTTCAATG CGCAGTTGGC CGCGAAGCTC GACGAGCCAG TCAGCCAAGT GGCGTTTGTA TTTGGTTTGC TGAGTCTGTC TTTGGCCGTG GCGTCTTCCA TGGCGGGCAA ATTACAGGAA CGCTTCGGCG TGCGTAATGT CACCTTAGGT GCAGGCCTAT TACTCGGGCT GGGATTTTTA CTCACTGCCC AAGCCAGTAA CTTAATGATG CTTTACCTGT GTGCCGGGAT TTTAGTGGGC TTTGCCGATG GTACTGGCTA CTTGATGACC TTGTCTAACT GCGTGAAGTG GTTCCCCGAG CGCAAAGGGC TGATTTCGGC GTTAGCGATT GGCGCTTATG GTCTAGGTAG CCTTGGATTT AAGTACATCA ACGTGCTGTT ACTCGAAAAT ACTGGCCTTG AAACCACCTT CCAACTGTGG GGCCTGATCG CCATGGCGCT GGTGTTATGT GGCGGCATGT TGATGAAAGA TGCGCCAGCA CAATCAGCCG CAAGTCAGCT GGCCGAAAGC CGCGACTTCA CCCTCGCAGA AGCCATGCGT AAACCGCAAT ATTGGATGTT GGCGCTGATG TTCCTGTCGG CCTGTATGAG TGGTTTGTAT GTGATTGGTG TAGCGAAAGA TATCGGCGAG AAGATGGTCG ACTTGCCAGT ACTGGTCGCT GCTAATGCGG TTGCGGTAAT TGCCATGGCG AATCTCAGTG GTCGTTTGGT GCTGGGTATC CTGTCGGACA AAATTCCTCG CATTCGAGTT ATTTCTCTGG CGCAGATCAT CACCTTAGTC GGTATGGTGT TACTGCTGTT CATCCCTTTG AATGCTAACC TGTTCTTCGT CGCCGTTGCC TGCGTTGCCT TTAGTTTTGG TGGCACTATT ACTGTTTATC CATCACTGGT GAGCGACTTC TTCGGCCTGA ATAACCTGAC TAAAAACTAT GGGGTTATCT ACTTAGGTTT TGGTGTCGGC AGCATTATCG GTTCGATTGT CGCCTCGTTA TTCGGTGGCT TTATTGCGAC CTTCAACGTG ATTTTAGTGC TGCTGGTGGT GGCGTTAGTG ATGTCATTAA CCATACGTAT GCCAGAGCCT AAAACCCCAG TGTCAGCCAA AAAAGCGACT AAGAGTACAC CGCGCTTAGT GAACATGACG GCAGAATCGG CGTAA
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Protein sequence | MTKEMNRTRY LTLVGTIITQ FALGSVYTWS LFNAQLAAKL DEPVSQVAFV FGLLSLSLAV ASSMAGKLQE RFGVRNVTLG AGLLLGLGFL LTAQASNLMM LYLCAGILVG FADGTGYLMT LSNCVKWFPE RKGLISALAI GAYGLGSLGF KYINVLLLEN TGLETTFQLW GLIAMALVLC GGMLMKDAPA QSAASQLAES RDFTLAEAMR KPQYWMLALM FLSACMSGLY VIGVAKDIGE KMVDLPVLVA ANAVAVIAMA NLSGRLVLGI LSDKIPRIRV ISLAQIITLV GMVLLLFIPL NANLFFVAVA CVAFSFGGTI TVYPSLVSDF FGLNNLTKNY GVIYLGFGVG SIIGSIVASL FGGFIATFNV ILVLLVVALV MSLTIRMPEP KTPVSAKKAT KSTPRLVNMT AESA
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