Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal_4205 |
Symbol | |
ID | 4842538 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS155 |
Kingdom | Bacteria |
Replicon accession | NC_009052 |
Strand | - |
Start bp | 4923956 |
End bp | 4925521 |
Gene Length | 1566 bp |
Protein Length | 521 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 640121483 |
Product | general secretory pathway protein E |
Protein accession | YP_001052539 |
Protein GI | 126176390 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG2804] Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB |
TIGRFAM ID | [TIGR02533] general secretory pathway protein E |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.381078 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTGAAA TACAATTATC CCAAGTCGAT GACCTCAGCC AAGTCTCCAA TGAGCTAGGT CTGGAAGCTG AAGGTGATGA GGTGTTTCGT TCGAGCAGTA AAGAGCGTTT ACCCTTTGCC TTTGCCCATC GCCACGATGT GGTGCTTGCG CCGGGTGAAA CGGGCGAGTT GAGCTTATTT TATACCAGCA AAACACCGTT AACGGCCATG CTCGAAGCAC GGCGCTATTC AGGTGTCGAT TTGCCTTTGG TTAAGCTCGA AGTCGCGAAG TTTGAGGCCA AACTCACTCA AGCGTATCAG GCGAACTCGT CTGAAGCGCA GCAGTTGATG GAAGATATCG GCAACGAGAT GGATTTATTC ACCCTTGCCG AAGAGCTGCC GCAGACCGAA GACTTGCTCG AAGGTGATGA TGACGCGCCT ATCATCAAAC TGATTAATGC CTTGTTATCT GAAGCGATTA AAGAAGAAGC CTCGGATATC CACATCGAAA CCTACGAGAA ACAGCTCGTA GTGCGTTTCC GTATCGATGG TGTGCTCAAG GAAGTCCTCA AGCCAAACCG TAAGCTGTCG TCGCTATTAG TGTCGCGGAT TAAGGTGATG GCGCGCCTCG ATATCGCCGA AAAACGTGTG CCACAGGATG GCCGTATTTC GCTACGTATC GCAGGTCGTG CGGTGGATGT GCGGGTATCG ACCATGCCAT CTAGCCATGG CGAGCGCGTC GTGCTGCGTC TGCTGGATAA AAATACCGGT AACCTCGATT TAGAACAACT GGGGATGACC GACGGTATTC GGGTTAAGTT TGAAGATCTT ATTCGTCGCC CCCACGGCAT CATTCTGGTC ACTGGCCCAA CGGGTTCAGG TAAAAGTACC ACCTTGTATG CGGGTCTGAC TGAGATCAAC TCAAAAGACA CCAACATACT TACTGTCGAA GACCCTATCG AATACGAGCT AGACGGTATC GGTCAAACCC AAGTTAACAC TAAGGCTGAC ATGACCTTCG CCCGAGGTCT GCGCGCGATT TTGCGTCAAG ATCCCGATGT GGTGATGATA GGCGAGATCC GTGACTTGGA AACCGCACAA ATTGCGGTGC AAGCATCGCT CACTGGTCAC ATGGTAATTT CAACCCTGCA TACCAACACA GCGTCTGGCG CGATTACGCG TTTGCAAGAC ATGGGCGTTG AGCCATTCCT CGTATCATCG AGTTTGCTCG GTGTGTTGGC GCAACGTTTG ATCCGTACCC TTTGTCCGAA ATGTAAAATC GAGCACGTGC CCGATGCACG TGAGCGTGAG TTACTGGGCA TAGCAGCCGA TGACGACAGA CGTATTTTCC GTGCCAATGG CTGTAAATCC TGTGGTAACA ATGGCTACCG TGGTCGAACG GGTATTCATG AGTTATTGCT GGTTGACGAC AATGTACGCG AATTGATCCA TGGCGGCCGC GGTGAGTTAG CTATCGAAAA GTATATCCGT CAGTTTGTGC CGAGCATTCG TCACGATGGC ATGAGCAAAG TGCTCGCGGG CATCACCACT CTCGAAGAAG TGCTACGTGT GACTCGCGAG GAGTAA
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Protein sequence | MSEIQLSQVD DLSQVSNELG LEAEGDEVFR SSSKERLPFA FAHRHDVVLA PGETGELSLF YTSKTPLTAM LEARRYSGVD LPLVKLEVAK FEAKLTQAYQ ANSSEAQQLM EDIGNEMDLF TLAEELPQTE DLLEGDDDAP IIKLINALLS EAIKEEASDI HIETYEKQLV VRFRIDGVLK EVLKPNRKLS SLLVSRIKVM ARLDIAEKRV PQDGRISLRI AGRAVDVRVS TMPSSHGERV VLRLLDKNTG NLDLEQLGMT DGIRVKFEDL IRRPHGIILV TGPTGSGKST TLYAGLTEIN SKDTNILTVE DPIEYELDGI GQTQVNTKAD MTFARGLRAI LRQDPDVVMI GEIRDLETAQ IAVQASLTGH MVISTLHTNT ASGAITRLQD MGVEPFLVSS SLLGVLAQRL IRTLCPKCKI EHVPDARERE LLGIAADDDR RIFRANGCKS CGNNGYRGRT GIHELLLVDD NVRELIHGGR GELAIEKYIR QFVPSIRHDG MSKVLAGITT LEEVLRVTRE E
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