Gene Sbal_4200 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal_4200 
Symbol 
ID4841640 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS155 
KingdomBacteria 
Replicon accessionNC_009052 
Strand
Start bp4920528 
End bp4921319 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content51% 
IMG OID640121478 
Productgeneral secretion pathway protein J 
Protein accessionYP_001052534 
Protein GI126176385 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG4795] Type II secretory pathway, component PulJ 
TIGRFAM ID[TIGR01711] general secretion pathway protein J
[TIGR02532] prepilin-type N-terminal cleavage/methylation domain 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCTTAA AACTGACTAG TGTGCAGCGG GGATTTACCC TGCTAGAAAT GCTGATCGCC 
ATCGCGATTT TCGCCATGAT AGGTTTGGCT TCTAATGCCG TGCTCAGCAC TGTGCTGACT
AACGATGAAG TGACACGCAC TTTCTCTACT CGGCTTAAGG CCCTGCAGCA AGGCTTTGGT
GCGATTGAGC GTGATCTCGC CCAAATGGTG GCGCGCACAC CCAGATTACT CGAAGGGGGT
CGAGGTTCGA CCGTCTTCCA AACGGGCAAT GATATCTTAG ACTCGGAATC AGAAGCCTTA
GTGTTTTACC GTTTAGGTTG GTTAAATCCC GACGGTTTAT TACCGCGGGG CAGCTTACAG
TCTGTGGCGT ATGTGGTGCA TGAAGGGCGC CTGGAGCGTT GGTATTTTCC TTATCCTGAG
CCTGAATTTG GTGCCGAGCC GATTAAGACA GTGGTCATAG ATAAAGTATT GTCGGTGGAA
TATTCCTTCT TTATGGATGA CAAATGGGAG CGCAAAGTCG AGGCGACTAA GTTGCCTAAA
GCGATCGCCA TGGAAATTGA GATTGAAGGC TTAGGCAAGA TCCAACGTAA GTTCTTGCTG
CCGCTAGGTG CTGCCGCACC TGACAAGTCC AAAGATGAAG ACAATAAAGA CGAAAATCCA
GACGATGCCA ACAAAGATAA AAACGGCTCA GGCAATGGCA GTGGAACCGG CAATGGTTCC
GGCAATGGTT CCGGTGACCC AGATTCTGGC GATTCCGGAG ACGGTGATCC AGACGCAGAG
GGCCGCAAAT GA
 
Protein sequence
MSLKLTSVQR GFTLLEMLIA IAIFAMIGLA SNAVLSTVLT NDEVTRTFST RLKALQQGFG 
AIERDLAQMV ARTPRLLEGG RGSTVFQTGN DILDSESEAL VFYRLGWLNP DGLLPRGSLQ
SVAYVVHEGR LERWYFPYPE PEFGAEPIKT VVIDKVLSVE YSFFMDDKWE RKVEATKLPK
AIAMEIEIEG LGKIQRKFLL PLGAAAPDKS KDEDNKDENP DDANKDKNGS GNGSGTGNGS
GNGSGDPDSG DSGDGDPDAE GRK