Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal_4198 |
Symbol | |
ID | 4841638 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS155 |
Kingdom | Bacteria |
Replicon accession | NC_009052 |
Strand | - |
Start bp | 4918024 |
End bp | 4919211 |
Gene Length | 1188 bp |
Protein Length | 395 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 640121476 |
Product | general secretion pathway protein L |
Protein accession | YP_001052532 |
Protein GI | 126176383 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3297] Type II secretory pathway, component PulL |
TIGRFAM ID | [TIGR01709] general secretion pathway protein L |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAGTGAAC GGCTATTTAT TCGCTTAGGC AGAACAGCAG AGCAAGCATG CTCTTGGCTC GTTTGGTCTG AGCAAGAACA GGAAATTATC GCCTCTGGCG AGCTCGCCAA TGCCCAAGGT TTGTCGACCT TAACTGAGCG TGCGGGTAAT CGTCCCGTCG ATGTGTTAGT GCCCGCCGCG GCAATGACAC TCACTAGCGT GCATTTGCCC GAAAAAGGCC AACGCCAAGC CTTGAAAGCC TTGCCCTTTA TGCTCGAAGA AGCCTTAGCC GAGGACGTCG ATGCCATGCA TTTTACCGTC GGCCCGCGTG ATGGTGATGC CTTAAGCGTG GTGGCCGTGG CCCATGAGCA AATGCAGACT TGGCTGAGCT GTTTGACCGA GGCGGGTTTA AAAGTGAAGC GCATCGTACC CGACTGCTTA GCCTTACCAT TGCAAGAGTG TCAATGGGCG GCAATGAATT TTGGTAATGA ACTATTACTG CGTACCGGAT TAGCCACGGG CCAGAGTTTA CCTTTGCCTT GGTTACCGAT TGCGCTGGAA CAACTTAGGC CCGCACAGGG CGAAGTGTCT GTCGCCAGTT ATACCGACAT GCAACTCGAA GGGGTTGAGC TTAAGCCACA ATCACTCGAG CTGCCTATGT TAGTGTTAGC CCGCGGTATT TTGCATGCGC CAGTGAACTT ACTGGGCGGC GTTTACACGC CTAAGCGCGA ATACAGCAAG CAGTTGATGA TGTGGAAGAG TGCTGCCATC GTTATCGCCA TCGCTTGTGT GCTGGCCTTG GTGAATAAAG GGCTGACCAT ACATCAAGTC AATGGTCAGA TTGCCGATCT TAAAGCCCAG AGCGAATCCA TTTATCAGCA GCTGGTGCCG GGAAATTCGC GCATTGTTAA CCTGCGTTCG CAGATGGAAA GTCAATTACG CGCATTGCAA GGACAGGGCA GTGGCGCCGA GTTTTTTGCC ATGCTCGATG GTTTGCAGGA TGCCTTTAAG CAAGTACCTG AACTTAAACC TAATAGCTTA AGATTCGAAA GCGCGCGTAA TGAGATCCGC ATGCAAGTGA GTGCGAAAAA CTACGCGCAA ATCGAGAAGT TTAAAGAGAT CGTTGGACGT CGTTTCCAAC TCGACGGCGG CACTATGAAC AGCGGTGAAG ATCAAGTCAC CAGTACCTTA ACCTTGAGGA GCAAATAA
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Protein sequence | MSERLFIRLG RTAEQACSWL VWSEQEQEII ASGELANAQG LSTLTERAGN RPVDVLVPAA AMTLTSVHLP EKGQRQALKA LPFMLEEALA EDVDAMHFTV GPRDGDALSV VAVAHEQMQT WLSCLTEAGL KVKRIVPDCL ALPLQECQWA AMNFGNELLL RTGLATGQSL PLPWLPIALE QLRPAQGEVS VASYTDMQLE GVELKPQSLE LPMLVLARGI LHAPVNLLGG VYTPKREYSK QLMMWKSAAI VIAIACVLAL VNKGLTIHQV NGQIADLKAQ SESIYQQLVP GNSRIVNLRS QMESQLRALQ GQGSGAEFFA MLDGLQDAFK QVPELKPNSL RFESARNEIR MQVSAKNYAQ IEKFKEIVGR RFQLDGGTMN SGEDQVTSTL TLRSK
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