Gene Sbal_4116 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal_4116 
Symbol 
ID4845829 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS155 
KingdomBacteria 
Replicon accessionNC_009052 
Strand- 
Start bp4824033 
End bp4824656 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content42% 
IMG OID640121382 
Productpilus assembly protein PilO 
Protein accessionYP_001052450 
Protein GI126176301 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3167] Tfp pilus assembly protein PilO 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.106455 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACTCG ATCTAAGTCA ATTCAATGAT ATCGATTTTG AAAATATTGG TGGCTGGCCC 
AACCAAGTTA AAACCTTTTT CGCGATCCTA TTAGCATTTT TTGTTTTTGC TGCGGGTTAT 
TTTTTGGTCG TTTCAGATTC GGTCGATACC TATACAGCTG AGCAAGATAA GGAGGTGCAA 
CTTAGAGATG ACTTTAAAAA TAAGTATCAA CTTGCCGCAA ATTTAAAACT CTATCGTGAG 
CAGTTAGCAA CGATGGAAGT GCAATTTGCC GAGTTACTGA AGATGCTGCC CTCTGAGAAT 
GAAATGCCTG GTTTGCTAGA CGATTTAACC TTCGTAGCGA CCGATGCAGG ACTTCGAATA 
AAGAGCTTAG ATTGGGAGCC TGAAATTCAG CGGGATTTCT ATATTGAGTT TCCCATCAAA 
ATGTCCGTGA CGGGCGATTA TCATCAGCTA GGTAATATGG TGAGTGGCGT AGCAAAACTG 
CCACGTATTG TCAGCCTTCA TGATTTTACC ATTAAGCGCG ATGATGCTGG CAACTTAGCA 
ATGGACATTT TAGCCAAGAC CTATCGCTTT AAAGAGGGGG CTGAATTACC GCCTGAAAAG 
CCTGCTAAGA AGGGGAAGAA ATAA
 
Protein sequence
MKLDLSQFND IDFENIGGWP NQVKTFFAIL LAFFVFAAGY FLVVSDSVDT YTAEQDKEVQ 
LRDDFKNKYQ LAANLKLYRE QLATMEVQFA ELLKMLPSEN EMPGLLDDLT FVATDAGLRI 
KSLDWEPEIQ RDFYIEFPIK MSVTGDYHQL GNMVSGVAKL PRIVSLHDFT IKRDDAGNLA 
MDILAKTYRF KEGAELPPEK PAKKGKK