Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal_4005 |
Symbol | |
ID | 4845070 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS155 |
Kingdom | Bacteria |
Replicon accession | NC_009052 |
Strand | + |
Start bp | 4699734 |
End bp | 4701911 |
Gene Length | 2178 bp |
Protein Length | 725 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640121268 |
Product | ABC transporter related |
Protein accession | YP_001052341 |
Protein GI | 126176192 |
COG category | [V] Defense mechanisms |
COG ID | [COG2274] ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain |
TIGRFAM ID | [TIGR03375] type I secretion system ATPase, LssB family |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGTCAGCTG CAGCTTCTGA AAAAATTGAC CAATGGACCA TTTCAGCCTC GCAAAGAGTC TTAGTGGACC CGCTGCTGGA TTGTTTAGTG TTACTCACTG AGCATTTTGG CAACCCGTGC TCGAGCGACT CGCTTGCGGC AGGTTTACCT TTGTCAGGTG CGGTATTAAC ACCCGATTTA TTGCCTCAGG CCGCATCGAG AGCTGGCCTA GCGGCGAAGT TATCTCGAAA AGGCTTAAAC GAAGTATCAC CCATATTGCT TCCTTGCATT TTGTTATTAA AAGACAAGAA AGCCTGCATA TTGCGTGAAC TCGATGTTGA GTCCGATAAA GCGATTATTC AATTACCCGA GACAGGTGGT GAAGAGACGC TGACAATTGA GTCGCTCGAA GCCTTATATG TGGGATATTT ATTCTTAGTT AAACAAGAAT ACCGTGGTGA CATGGGCTTT GATGTTTATC TACACGATAA TAAAACCCAC TGGCTAGTCC AAACCTTAAA AGATTCTGCG CCCATTTATC GCGATGCATT AATCGCTTCT GTATTAGTGA ATTTGTTCGC CTTAGTTTCA CCTTTATTTA TTATGAACGT GTATGACAAA GTCGTGCCCA ATCTTGCCTT TGAATCCCTG TGGGTGTTAG CGATTGGCGC TTCTATTGCT TATCTGTTTG ATCTTGTCAT GCGGCAGCTC AGAAGCTACC TGATTGATGT AGCCGGTAAA AAAGTGGACA TCATAGTATC TTCTCGCCTA TTTGCAAAAG CGATTGGTAT CCCCTTAGAA AAACGCTCCC CCAGTATTGG CGGTATGGCA AAACAATTAG GCGAATTCGA TAACATCCGT GAAATTTTAA CCTCGGCGAC GATCACAACT TTAGTCGATC TGCCCTTTGC GGTATTTTTC TTAATTATTA TCTACATCGT TGCCGGCGAT CTCGCCATTG TTCCAGTGAT CGGTGGCGCC ATCATTATTG GCTTTACACT TTATATCCAA CCTAAACTCA AAGCCGCTAT CGAAGAAGGC AATAAATTTT CAAGCCTGAA ACATGGGCAT TTAATTGAGA GTTTATCGGC ACTAGAGTCA ATCAAAGCCA ATGGGGCCGA AGGGATAGTA CAAAAAAGCT GGCAACAAAT GATAGGCCAC AGTGCCAACT GGCAATTAAG GTCAAAAAAG CTCTCCAACT CTGTCTCGAA CGTGGCTAAC TTCACAGTGC AATTTACCGT TGTTTGTGTG GTGATTTTGG GCGTTTATCG CGTGGCCGAT AATGCGATAT CGATGGGCGG AATTATTGCA GCCGTTATGT TATCAAGCCG TGCTATTTCA CCTATGGCGC AGCTTGCAGG CCTGATGAAC AGAGCAAATC ACACTGCCAG CGCACTGCGC CAGCTTAATG AAATCATGAC TCAAGAAGAT GAGTTTGAAA AGAAAGGGCA TTTGGTTAGC AAACAAAGGC TAATAGGCAA AATCAATGCT GATCATGTCG GTTTTGGTTA CCCAGGTTCA GAAAAACCTG TACTTCATCC TATGTCATTG ACGATTAATC CCGGCGAGCG TATTGCGATT ATTGGCCGCA ATGGTTCAGG TAAAAGTACC CTTGCTAAGC TATTGGTTGG ACTATTTCAA CCGACAGCAG GAAGCCTGCG TTATGACGGT TTAGACTCGG CACAAATCCA TCCGAGTGAT TTACGCCGTA ACTTTGGTTA TTTGCCCCAA GATGTCACCC TGTTCCACGG TTCGATTCGC GACAATATTT TATTTGGTAC CCGCCAAGTC ACTGAACATC AGCTAATCCG TGCCGTACAA CTTTCTGGGG TAAGCCAATT TACCAACCTA GAAGCAGAAG GGTTAGATCA GCAGGTCGGT GAAGGTGGTA TGTCACTCAG TCGCGGACAA AGGCAAACCG TTGCCCTTGC GCGTGCCACA CTCAATGATC CACCAGTGCT ACTAATGGAT GAGCCCACCG CCAGCTTGGA TGCGCGTGCA GAACAACAAT TTATTCGCTC AATGCAGAAT GTTAGCAAAG ACAGAACCTT GATTCTTATT ACCCATAAGA TGCATCTACT GCAACTTGTT GACCGTATTA TCGTACTCGA ACGCGGTCAT GTGGTCGCAG ATGGTCCCAA GGCAGAAGTG TTAGAAAAAC TCAATTTTGG CCTCGTGAAT GGAGAAGCTA AAAGATGA
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Protein sequence | MSAAASEKID QWTISASQRV LVDPLLDCLV LLTEHFGNPC SSDSLAAGLP LSGAVLTPDL LPQAASRAGL AAKLSRKGLN EVSPILLPCI LLLKDKKACI LRELDVESDK AIIQLPETGG EETLTIESLE ALYVGYLFLV KQEYRGDMGF DVYLHDNKTH WLVQTLKDSA PIYRDALIAS VLVNLFALVS PLFIMNVYDK VVPNLAFESL WVLAIGASIA YLFDLVMRQL RSYLIDVAGK KVDIIVSSRL FAKAIGIPLE KRSPSIGGMA KQLGEFDNIR EILTSATITT LVDLPFAVFF LIIIYIVAGD LAIVPVIGGA IIIGFTLYIQ PKLKAAIEEG NKFSSLKHGH LIESLSALES IKANGAEGIV QKSWQQMIGH SANWQLRSKK LSNSVSNVAN FTVQFTVVCV VILGVYRVAD NAISMGGIIA AVMLSSRAIS PMAQLAGLMN RANHTASALR QLNEIMTQED EFEKKGHLVS KQRLIGKINA DHVGFGYPGS EKPVLHPMSL TINPGERIAI IGRNGSGKST LAKLLVGLFQ PTAGSLRYDG LDSAQIHPSD LRRNFGYLPQ DVTLFHGSIR DNILFGTRQV TEHQLIRAVQ LSGVSQFTNL EAEGLDQQVG EGGMSLSRGQ RQTVALARAT LNDPPVLLMD EPTASLDARA EQQFIRSMQN VSKDRTLILI THKMHLLQLV DRIIVLERGH VVADGPKAEV LEKLNFGLVN GEAKR
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