Gene Sbal_4004 details

Gene Information

• Locus tag: Sbal_4004
• ID: 4845069
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella baltica OS155
• Kingdom: Bacteria
• Replicon accession: NC_009052
• Strand: +
• Start bp: 4692923
• End bp: 4699642
• Gene Length: 6720 bp
• Protein Length: 2239 aa
• Translation table: 11
• GC content: 47%
• IMG OID: 640121267
• Product: putative outer membrane adhesin like proteiin
• Protein accession: YP_001052340
• Protein GI: 126176191
• TIGRFAM ID: [TIGR01965] VCBS repeat; [TIGR03661] type 1 secretion C-terminal target domain (VC_A0849 subclass)

Plasmid Coverage information

• Num covering plasmid clones: 0
• Plasmid unclonability p-value: 0.328168
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGGATCGG TAATTACATC AAAGAAAGGT TTGCTTAAGT TAGTAAAAGG GCAAATCAAT 
GTCGAAGTTG ATGGTTCAAA TCAACCCGCT AAGGATGGCG AACAACTCCC TAAAGGTGCT 
GTGCTCCATA TTGACGAAAA CGCAACCTAT GAGATCACCT TCGATGATGG CACTAAGCTA 
TCGAACGAAG TTGTCCCCAA TGAAACTGCA ACAGTAGCCA CCAACACCAC TGACGGGGCT 
GCCTTAGCTG AAATCCAAGC ATTACAAGAT TTAATCGCCT CTGGTGAAGA CCCAACTCAG 
AACCTTCCTG AAACCGCAGC GGGGAACACT CCAGGCCGTG ATGGTAACTC TGGCTATGTC 
ACTCTCGCTC GCAGTGGTAG TGAAGTCTTA GCCACATCAG GATACTCAAC CACTGGTCAA 
GCACTCACCG CGACTTCAGC CAATACTCCT GCACAAACTT TAGCTATAGA CTCTCCTTCA 
GTAGTAGTAA ATGACAGCAA TACTATCGAT GAAGATACTG TTGCTACTGG TAATGTGCTC 
GATAACGACA GTGATGTGGA TTCTATTTTA AGTGTTGTGA GCTTTGAAGT TGATGGTACA 
ACTTACGCAG CTGGCACTGA AGTGACTCTC GAAGGCGGCA CTTTAGTCAT TAACACTGAC 
GGCTCATACA CCTTTACACC AAATGAAAAC TGGAATGGCC AAGTTCCTGT CATTACCTAC 
ACAACTAATA CAGGCTCAAG CGCAACTCTT ACAATTAATG TCACTGCTAT AAACGATGTG 
CCTGTGATTG CCGGCGACGA TGTTGGCGCG GTGATGGAAG ACGCCACCGA TCCCATTCTG 
ACTGACAGCG GCACCTTGAC CATTACCGAT GCCGACAGCG GCCAAGCGGT GTTCCAAGCG 
GGCAGCGGCA CTCCGAGTGT TGGCGCGCTC GGCAGCTTAA CCATTGATGC GACGGGCAAC 
TGGACTTACA ACGTCGATAA CGCCGACGTG CAATACCTGG CCGAAGGCGA AACCAAGGTC 
GAAACCTTTG TGGTACTCAG TGCCGATGGC ACTGAGCACA CCGTCACCAT CACCATTACT 
GGCACCAACG ATGTGCCTGT GATTGCCGGC GACGATGTTG GCGCGGTGAT GGAAGACGCC 
ACCGATCCGG TTCTGACTGA CAGCGGCACC TTGACCATTA CCGATGCCGA CAGCGGCCAA 
GCGGTGTTCC AAGCGGGCAG CGGCACTCCG AGTGTTGGCG CGCTCGGCAG CTTAACCATT 
GATGCGACGG GCAACTGGAC TTACAACGTC GATAACGCCG ACGTGCAATA CCTGGCCGAA 
GGCGAAACCA AGGTCGAAAC CTTTGTGGTA CTCAGTGCCG ATGGCACTGA GCACACGGTC 
ACCATCACCA TTACTGGCAC CAACGATGTG CCTGTGATTG CCGGCGACGA TGTCGGCGCG 
GTGATGGAAG ACGCCACCGA TCCCATTCTG ACTGACAGCG GCACCTTGAC CATTACCGAT 
GCCGACAGCG GCCAAGCGGT ATTCCAAGCG GGCAGAGGCA CCCCGAGTGT CGGCGCGCTC 
GGCAGCTTAA CCATTGATGC GGCAGGCAAC TGGACTTACA ACGTCGATAA CGCCGACGTG 
CAATACCTGG CCGAAGGCGA AACCAAGGTC GAAACCTTTG TGGTACTCAG TGCCGATGGC 
ACTGAGCACA CCGTCACCAT CACCATTACC GGCACCAACG ATGTGCCTGT GATTGCCGGC 
GACGATGTCG GCGCGGTGAT GGAAGACGCC ACCGATCCCA TTCTGACTGA CAGCGGCACC 
TTGACCATTA CCGATGCCGA CAGCGGCCAA GCGGTATTCC AAGCGGGCAG CGGCACCCCG 
AGTGTCGGCG CGCTCGGCAG CTTAACCATT GATGCGGCAG GCAACTGGAC TTACAACGTC 
GATAACGCCG ACGTGCAATA CCTGGCCGAA GGCGAAACCA AGGTCGAAAC CTTTGTGGTA 
CTCAGTGCCG ATGGCACTGA GCACACGGTC ACCATCACCA TTACTGGCAC CAACGATGTG 
CCTGTGATTG GCACCACGAC CAGTGCCATA GTTTCGGAAG AAGGTTTAAC TCCTTTAGGT 
TTACCTGACA CAACAGGAAA TACAGATACA ACCAACAGCC CAACGGCGAC AGGTACGATT 
AATATCCAAG ATGTTGATAG TGATTCTTTA ACTGTGTCAC TGTCTGGACC TACAGGATTA 
TTATCTGGTG GCCAAGCAAT TCAATGGAGT TGGGATCCTG TCACGCAAAC TTTAACGGGT 
TATATTGGTA CTGCAGGTGA GGCTTCATAT ACCGAAATTA TGACTGCAAC ACTGACGCCA 
CCGGTTACTG GTAGTTCAGG AAATTGGACC TATGATGTCA CGCTTAAAGG TCCTGTCGAT 
CATCCAGATA CTGAGACAGA AGACACCTTG TCAGTCAATA TTGGCATCAA TGTTAATGAT 
GGCCATGGTG GTACATCAAC TGGAAGTTTC AATGTCACCA TTGAAGATGA TGCTCCAGTC 
ATATCACCAA TTGCAGCCGT GCAAACCACA ACGACAAGTA TTCCTGATTC ATTGGTGGGT 
TCATTCTCAC TCACTGGTTA CAGCGGCAAC AATAATTCAT TAGATTTCAA TGGATTTACA 
ATCAGTGCAA GAGGATTCAC TTCGTCAACT AACTCAAATT TAATTGATGC CGCAATCTTT 
GGTAGCGGTA GTGGGATAGA TGTTAGTAGC GCTGGTGCTC CTTATCATAA TCTCGCGAAC 
GAAGTCGATT TCCGTAAATT TGCAGATGGA AGTTCTGCAT CTGAAGAAAT CATCATTACT 
CTCGATCCTG GAACTATTGC CTACGGCGTA AATATCCAGT TTTCCCACAT GTTTGGTGGC 
GAACTAGAAG TCGGTGTCGT CGAGTTTTGG CGAGATGGCC AACTTATCGC AACTCAAACA 
TTTAGCTCAG ATGCCAGCAG TGGCGACTAT GCCGCCAACT TCCAAGCCTT ACAAGGCGGT 
TTTGACACTA TGGTCATCAA AGCCCTTGAT AATGGCCAGG GCCCAAGTAG CGGTGATAAT 
AGTGACTTCA CTGTTACCGC TATTGAGTTT TTAGGCACAA CTACTCCACC AGCAATCGCC 
TTTGCTTCAG GAACAGTTAG CCCTGATTGG GGCGCAGATG GTAAAGGTTC GCTCACCTTA 
CAAGGTAGTG ATGAAACCAA TTTATTCACG GCAACAGGCA GTGCAATTAC TATAACCCAA 
ACGGCAAATA CACTGATTGG GGTCGATGCA GCTGGTCACT TGGTATTCAA ACTTGAGTTC 
ACCCCAGGTA CAGGTCAATG GGACTTCCAT CAATATCAAG AGATGTTACA ACCTAGCGAT 
GGTGATATTG ATTTCAAAGT AAGAGCCACT GATGGAGATG GCGATCATAC AGATGGTACT 
TTCTCTGTTA TCCCACAAGT TTATGTTGAT ACAACACCAC CTTCGGCACC TGAAGTACGC 
ATCATCGATG ATGTAAATGA TGACGCGTAT TTGACGAGTA CAGAGATAGG TAATAATGGC 
GTTCAAATAC AGGTCAAAAT TAATGCTAGT GACTTTAATA CTGGCGGCAG TGTACATCTA 
GAAATCGATA ATGCAGGTAA TAGCAGTACA GTAGACCTCA TTCTTGACAA TGGCGTACTG 
AAATTTAGTA ATGGTGCTCT AGCAACAGGT TACACCTATA CAAATGGTGT TATTACTTGG 
ACAGAGCCTA CTCCAACTGC AGGTCAGGCA ATCTCAGTCA CCGCCACTCA AACTGATAGT 
GCGAATAATG AATCAGCTGA AGGCACGGAT AATGCTACCG TTATTGATGC GACTGACGAT 
CGTTATACCA TCGACGAAGA TCAGCAGCTA ACGGGTAATG TTCTTACCAA TGATCAACTC 
GGCAATCTGA GCATCACTAG CTTCAGAGTC ATGTATAACG GTATGCAAAC CAGTTTTAAC 
GCCGGACAAA CCGTTACCTT GGCCGTGGGT AGCTTATTAA TACAAGCCAA TGGTGAATTC 
CAGTTTATTC CAAATGATAA CTGGGCAGGC GAAATGCCAA GTGTCACCTA CATAACAAAT 
ACTGGTTCCA CAGCAGCACT TGATATCACT GTCTTACCTA TAGCAGATAA GCCTGTAGTT 
AACGTTATTC TGACTGATAA TGGCATACCG CTATACAGTA ACTTTAAGAC TTCAGGAATC 
ACTACCGAAC AATTCCGTAC GGGCGATTTT ACTAACGCAC CATTTAATAC TGGTACGCGT 
ACTATTGATA ATACTTCCGG ACAAGATCAG TTGCTCGGTA CTGGAGGGAA CGATCATCTT 
GTCAGCGCAA ATGGCGGCGG TGATCTACTC TACGGTATGG ATGGTGATGA CATACTCGTC 
GGCAGTGATG CCGTTCAAGG TGACTCTCTC TATGGCGGAA CAGGAAATGA TGTTCTTGTT 
GCTGGTCTAG GTAATGACGG GCTCTACGGT GGTGCGGGAA CAGATATCGC CGTACTTCTT 
GGCAACCGAG CCGACTACAT AATAGAGAAA GGCACTGGCT ACTCTAGTAA TGATCGTTGG 
TTCAACTTCT TTGTAACTGA AAATGGTATC GGTGTCACTA AGGCCCTGCA TGATATTGAG 
TATGTGCAAT TCAAGGATGG CATATACGCG ATCAATCAAA TCACAGGTGA ACTCACATTA 
GAACCGCCTA CAGCTGTAGA CTATCCAATC GAAATTAATG TGTCACTTGC GGATCGAGAC 
GGTAGCGAAA GCATCGATAG CATTCAGCTC AGTGGTTTAC CCGAAGGCAC CTTACTCTAC 
AGTAGTAACG GTACATTGAT GGGAACTGCA GATGCAGACG GTAATATTCT TCTAAATCAT 
GGCAGCGTAT GGAACAGTGC ATCTTTAGAT GTCAATCTGA CAGGATTAAC ATTAAGGGTT 
CCTGGTGAAT ATGCAGGTCA AGTCAACCTC GTTGTCGAAG CAGTATCAAG AGAGTCAGGT 
ACAGACCTGA CCAATACTGC AACAGATGCA GATAGCGTCA TTCTTAGCTA CTTCAGTGGT 
CATGAAGGAG AGCCTGGCGA TCAAAATCTT AACTTTGGTA ATGAGCACAA CATTGTGGTC 
GGCGATTTAG ACGGTAGCGT TATTTTGCCA GGTCAAAACT ACAATATCGC CTTTATGGTC 
GATAGTTCTG GCAGTATTGG AAGCACGGCG CTCAATAGCA TGACAGCGCA ACTTGAACAG 
GTGTTTACGA CACTGAAAAA CAGCGCTACC GCTGAAGGCA GCGGCACTGT AAATGTGTTC 
TTGGTTGACT TTGATGGCAT TTCTAAAGGT TGGGTTTCTG TCGATATGAA AGACCCCAAT 
GCCCTGTCGA TACTGGAAGA TGCATTGGAC GACATGCGTT CAGGTGGAAA CACCAACTAC 
GAAGATGTAT TTAAAACGAC CGCCAACTGG TTCTCTGGCA TCAGCGGTAA CAGTGCCACA 
AATCTGGCTT ACTTTATTAC CGATGGCCAA GCTAATGAGT ACAACTACAA TGAGGGCCAA 
AACCCTGAGG TTTATAACCC ACGCGGAGCA AACAACAGTA TTTACCTATC CAGTATCATC 
CAAAACGGTT ATGTATTTGG CAATATATAT AGCCAGGATG GACGTACGAT CATCAACCAG 
TACGGTGAAG TATTAAAATG GACCCAAAAT AGCAATAATA GTTGGAGCTC AAGTTCAGTT 
GGCTTTATGC GCCCAGATGG TAATGGAGGT TTCCAATTTG CCAACTTGGG TACAAACGGC 
ACCGGAACGA ATGCGAATTC CCAGCAAGGA TTTGCTTTCC TATCAACGCT AGGAGTGATT 
GTTCAGGCCA TTGGGATAGG CCCATCACTG GATAGTGAAG ATCTTAAGCC ATTTGACTCT 
GACGGTAATG TTCTGACTAA CATCAACGCT GAGGATTTAG CCGATGCGAT CATTGGTACT 
CCAATTACCC AACTGCCAGG ATCTGATACC ATCAACGGTG GTAACGGCGA CGATATACTC 
TTTGGTGATG CCATCAACTT TAACGGTATC AGTGGCCAAG GTTATGTTGC CATCAAAGAT 
TATGTTGCTG ATCAGCTAGG GATAGCTGCA GTAACCGATG CCCAAGTACA TAGATATATT 
ACTGAGCATG CATCTGATTT TGACCAATCT GGTGCCAGCG ATAAGGCAGA TGTTCTTATC 
GGCGGACAAG GTAATGACAT ACTTTATGGG CAAGGTGGGA ATGATCAGCT TTACGGCGGT 
AATGGTAATG ATCTTATATT TGGTGGTGCT GGTAACGATA CTATTATTGG GGGCCTAGGA 
AACGATAAAC TAACGGGTGG GACTGGTGCT GATACTTTCG TCTGGCAGGC TGGCGAGTCA 
GGAACAGACC ATATCACTGA CTTTAATATC CATGAAGATA AATTGGATTT ACGCGATCTA 
CTTCAAGGTG AAAATACCAA CACGCTAGAC AGCTATTTGA ATTTCAGCCT TAACAGTAGT 
GGCTCTACAG TGATCGATAT TGATGCCAAT CAAGACGGTG TCTTTGAACA ACATATCATC 
CTTGATGGTG TTAATTTGTT CGACGAATAT GGCAGCACTA ACGATGCTGG TATAATTAAT 
GGCTTACTGG GTAGTAATAA TGATGGTCCG CTAATCATTG ACTCTCAGCC TGTCACACCA 
GAACCTGTAC AAGGAATCGC ACCACTGGAT ACTAATCCAC ACCATAATAT TATTCCTTAA 

 

Protein sequence

MGSVITSKKG LLKLVKGQIN VEVDGSNQPA KDGEQLPKGA VLHIDENATY EITFDDGTKL 
SNEVVPNETA TVATNTTDGA ALAEIQALQD LIASGEDPTQ NLPETAAGNT PGRDGNSGYV 
TLARSGSEVL ATSGYSTTGQ ALTATSANTP AQTLAIDSPS VVVNDSNTID EDTVATGNVL 
DNDSDVDSIL SVVSFEVDGT TYAAGTEVTL EGGTLVINTD GSYTFTPNEN WNGQVPVITY 
TTNTGSSATL TINVTAINDV PVIAGDDVGA VMEDATDPIL TDSGTLTITD ADSGQAVFQA 
GSGTPSVGAL GSLTIDATGN WTYNVDNADV QYLAEGETKV ETFVVLSADG TEHTVTITIT 
GTNDVPVIAG DDVGAVMEDA TDPVLTDSGT LTITDADSGQ AVFQAGSGTP SVGALGSLTI 
DATGNWTYNV DNADVQYLAE GETKVETFVV LSADGTEHTV TITITGTNDV PVIAGDDVGA 
VMEDATDPIL TDSGTLTITD ADSGQAVFQA GRGTPSVGAL GSLTIDAAGN WTYNVDNADV 
QYLAEGETKV ETFVVLSADG TEHTVTITIT GTNDVPVIAG DDVGAVMEDA TDPILTDSGT 
LTITDADSGQ AVFQAGSGTP SVGALGSLTI DAAGNWTYNV DNADVQYLAE GETKVETFVV 
LSADGTEHTV TITITGTNDV PVIGTTTSAI VSEEGLTPLG LPDTTGNTDT TNSPTATGTI 
NIQDVDSDSL TVSLSGPTGL LSGGQAIQWS WDPVTQTLTG YIGTAGEASY TEIMTATLTP 
PVTGSSGNWT YDVTLKGPVD HPDTETEDTL SVNIGINVND GHGGTSTGSF NVTIEDDAPV 
ISPIAAVQTT TTSIPDSLVG SFSLTGYSGN NNSLDFNGFT ISARGFTSST NSNLIDAAIF 
GSGSGIDVSS AGAPYHNLAN EVDFRKFADG SSASEEIIIT LDPGTIAYGV NIQFSHMFGG 
ELEVGVVEFW RDGQLIATQT FSSDASSGDY AANFQALQGG FDTMVIKALD NGQGPSSGDN 
SDFTVTAIEF LGTTTPPAIA FASGTVSPDW GADGKGSLTL QGSDETNLFT ATGSAITITQ 
TANTLIGVDA AGHLVFKLEF TPGTGQWDFH QYQEMLQPSD GDIDFKVRAT DGDGDHTDGT 
FSVIPQVYVD TTPPSAPEVR IIDDVNDDAY LTSTEIGNNG VQIQVKINAS DFNTGGSVHL 
EIDNAGNSST VDLILDNGVL KFSNGALATG YTYTNGVITW TEPTPTAGQA ISVTATQTDS 
ANNESAEGTD NATVIDATDD RYTIDEDQQL TGNVLTNDQL GNLSITSFRV MYNGMQTSFN 
AGQTVTLAVG SLLIQANGEF QFIPNDNWAG EMPSVTYITN TGSTAALDIT VLPIADKPVV 
NVILTDNGIP LYSNFKTSGI TTEQFRTGDF TNAPFNTGTR TIDNTSGQDQ LLGTGGNDHL 
VSANGGGDLL YGMDGDDILV GSDAVQGDSL YGGTGNDVLV AGLGNDGLYG GAGTDIAVLL 
GNRADYIIEK GTGYSSNDRW FNFFVTENGI GVTKALHDIE YVQFKDGIYA INQITGELTL 
EPPTAVDYPI EINVSLADRD GSESIDSIQL SGLPEGTLLY SSNGTLMGTA DADGNILLNH 
GSVWNSASLD VNLTGLTLRV PGEYAGQVNL VVEAVSRESG TDLTNTATDA DSVILSYFSG 
HEGEPGDQNL NFGNEHNIVV GDLDGSVILP GQNYNIAFMV DSSGSIGSTA LNSMTAQLEQ 
VFTTLKNSAT AEGSGTVNVF LVDFDGISKG WVSVDMKDPN ALSILEDALD DMRSGGNTNY 
EDVFKTTANW FSGISGNSAT NLAYFITDGQ ANEYNYNEGQ NPEVYNPRGA NNSIYLSSII 
QNGYVFGNIY SQDGRTIINQ YGEVLKWTQN SNNSWSSSSV GFMRPDGNGG FQFANLGTNG 
TGTNANSQQG FAFLSTLGVI VQAIGIGPSL DSEDLKPFDS DGNVLTNINA EDLADAIIGT 
PITQLPGSDT INGGNGDDIL FGDAINFNGI SGQGYVAIKD YVADQLGIAA VTDAQVHRYI 
TEHASDFDQS GASDKADVLI GGQGNDILYG QGGNDQLYGG NGNDLIFGGA GNDTIIGGLG 
NDKLTGGTGA DTFVWQAGES GTDHITDFNI HEDKLDLRDL LQGENTNTLD SYLNFSLNSS 
GSTVIDIDAN QDGVFEQHII LDGVNLFDEY GSTNDAGIIN GLLGSNNDGP LIIDSQPVTP 
EPVQGIAPLD TNPHHNIIP