Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal_3981 |
Symbol | |
ID | 4845027 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS155 |
Kingdom | Bacteria |
Replicon accession | NC_009052 |
Strand | - |
Start bp | 4669480 |
End bp | 4670781 |
Gene Length | 1302 bp |
Protein Length | 433 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640121245 |
Product | sigma-54 dependent trancsriptional regulator |
Protein accession | YP_001052318 |
Protein GI | 126176169 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGGTGGCC TAAGTATACG GATTGAAGGA TTAAACATAT CTGCGGAACT TGCATGCACA ATCGCACAGG GAGATTTTTA TCTGTGGAAT GATGCAATGG AGTCGTCTTG GCTCACGATC GTTAACTTAT CAGATTGTCG TCCTTGTGAT GTAAAATCTT ATCTTGCCCG TTTTCCTTGC CGTAATATTG TCGCGTTATT AGCGCCAGAA CAAGGTGAGT TAGCCGCGGC GGCAATGCGT GCTGGTGTAC AAGATTATCT ATTAATTCCC GTAGAAACCG AGCAACTGCT AGCCTCAATA CAACGTTTAC GCCGTTTAGA GTTACCTGAT TCTAGTTTGG TTGTATCGGC TGCTGTTAGC CGGCAACTAT TGATGTTGGC CCATAGGGCA GCAACCACTG AGGCCAGTGT TTTATTATTG GGTGAAAGTG GTACTGGCAA GGAGCCGCTT GCTCGTTATA TTCATCGTCA TTCTTCTCGT TCTCATAAGC CTTTCGTTGC GATTAACTGC GCCGCCATCC CTGAAAGTAT TCTTGAATCT GTCTTATTTG GTCATGTTAA AGGCGCCTTT ACTGGTGCTA TTTGCGATAA AGCAGGCAAA TTTGAGCAGG CAAATGGCGG CACTTTATTA CTCGATGAAA TTGGTGAAAT GCCCTTGCCG TTGCAGGCAA AATTACTCCG AGTGTTACAG GAGCGTGAAG TCGAAAGACT CGGCGGGCAG CATGCTATTC CACTGGATAT CAGAATCATT GCCTCTACCA ATCGCGACTT AAGACAGGCC GTTGAGTTTG GGCATTTTAG GGAGGATCTG TTCTACCGTT TAGATGTTTT GCCTTTAAAA ATCGCGCCTT TAAGAGAACG TAAGGCTGAC ATCCTCCCTT TAGCTGAGCA TTTCTTAGGT TTATATGGTC AGTCCGATAA CGCAAGTCGT TGCTATTTCA GTGAGCACGC AAGGCAAGTG CTTGTTACCT ATGATTGGCC GGGAAATGTT AGAGAGCTAG AAAATTGTAT TCAGCGGGCA TTAGTGATGC GCAGAGGTCA GGCTATTCAA GTTGCTGAAC TCGGATTAAA CATTCAAGAA GAAACGCTCG AGTTAGAGCC TTTGGGCGCG ACGGTAGGAC TTAAAGCTTC AAAACAGCAG GCAGAATTTC AATATATTAT TGATGTACTT AAACGTTTTA ATGGACAACG CACTTTAAGT GCGCAGGCGC TAGGGATGAC GACTAGAGCC TTAAGATATC GCCTCGTGCA AATGCGAGAA GCAGGGATTG ATATTGAAAC GTTATTAGAT CAAGCAGCGT GA
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Protein sequence | MGGLSIRIEG LNISAELACT IAQGDFYLWN DAMESSWLTI VNLSDCRPCD VKSYLARFPC RNIVALLAPE QGELAAAAMR AGVQDYLLIP VETEQLLASI QRLRRLELPD SSLVVSAAVS RQLLMLAHRA ATTEASVLLL GESGTGKEPL ARYIHRHSSR SHKPFVAINC AAIPESILES VLFGHVKGAF TGAICDKAGK FEQANGGTLL LDEIGEMPLP LQAKLLRVLQ EREVERLGGQ HAIPLDIRII ASTNRDLRQA VEFGHFREDL FYRLDVLPLK IAPLRERKAD ILPLAEHFLG LYGQSDNASR CYFSEHARQV LVTYDWPGNV RELENCIQRA LVMRRGQAIQ VAELGLNIQE ETLELEPLGA TVGLKASKQQ AEFQYIIDVL KRFNGQRTLS AQALGMTTRA LRYRLVQMRE AGIDIETLLD QAA
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