Gene Sbal_3977 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal_3977 
SymbolfliH 
ID4845023 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS155 
KingdomBacteria 
Replicon accessionNC_009052 
Strand
Start bp4665711 
End bp4666421 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content48% 
IMG OID640121241 
Productflagellar assembly protein H 
Protein accessionYP_001052314 
Protein GI126176165 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1317] Flagellar biosynthesis/type III secretory pathway protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAAACA AGCATTCTCG TTGGCGTCTA AATACCAATC TCGCACGTCG TTATCGTTTT 
CCTGCGTTGC ACGACGCGAT TGAATCGAAC TCAGATGCGG GCGGTGATTT TCAAAGTTAT
CAACAAGCAT TTGACGAGGG TTATGACGAA GGTGTCATCC AAGGTAAGAG TGCGGGTTAT
GAGGCTGGTC TTGAAGAGGG CCGCATTGCT GGGCATGCTG CTGGTTTTCA TCAAGGCAAG
TTAGACGGGC AGTCAGCGGG CAGATCATCC ATCGATGAGC AGCTCAACAG TTTGCTTGTG
CCACTTGGTG CCTTGAGAGA GTTACTTGAA GACGGCCATG CAAAGCAGGT TCGTGAGCAG
CAGAATTTGA TCTTGGATTT AGTGCGCCGA GTGTCACAAC AAGTGATCCG TTGCGAATTA
ACACTGCAGC CGCAACAAAT TCTTAAGCTG GTTGAAGAAA CCTTGAGTGC GTTGCCCGAT
GATCAAGTGG ATGTCAAAAT CCACTTAGAG CCAAGTGCGG TTGTGAAATT AAAAGAGCTC
TCGGAAGATA AAATCCGTGG CTGGAACCTC ATCGCAGATA GCAGTATTTC TGCGGGCAGT
TGTCGTATTG TAAGTGATAA ATCCGATGCA GATGCTTCAG TCGAAACGCG ACTCGATGCC
TGCATGAAGC AGGTTGAAAC CAAGTTGAAT GAGGTTGAGA TTGGAGTCTG A
 
Protein sequence
MENKHSRWRL NTNLARRYRF PALHDAIESN SDAGGDFQSY QQAFDEGYDE GVIQGKSAGY 
EAGLEEGRIA GHAAGFHQGK LDGQSAGRSS IDEQLNSLLV PLGALRELLE DGHAKQVREQ
QNLILDLVRR VSQQVIRCEL TLQPQQILKL VEETLSALPD DQVDVKIHLE PSAVVKLKEL
SEDKIRGWNL IADSSISAGS CRIVSDKSDA DASVETRLDA CMKQVETKLN EVEIGV