Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal_3921 |
Symbol | |
ID | 4844142 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS155 |
Kingdom | Bacteria |
Replicon accession | NC_009052 |
Strand | + |
Start bp | 4616576 |
End bp | 4617490 |
Gene Length | 915 bp |
Protein Length | 304 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640121187 |
Product | prepilin peptidase |
Protein accession | YP_001052260 |
Protein GI | 126176111 |
COG category | [N] Cell motility [O] Posttranslational modification, protein turnover, chaperones [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1989] Type II secretory pathway, prepilin signal peptidase PulO and related peptidases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.985112 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCAGAAT TCATCTCCCT TTTGGGCCAG CACCCTTATC TCTTTATTGC TCTAAGCTTT ATTTTTGCCG CTACCATTGG TAGTTTTTTA AACGTGGTAA TCCACAGATT TCCTGTGATG ATGAAACGTG AGTGGCAGCA AGAATGTAAT CAGTATTTGC AGGAATACCA CGAAGATATA GTCAACAAGA TAGGTATAAA CCAACTCAAT AAACCTATTG ATGCCTTCCC AGAGAAGTAT AATCTGGTTG TGCCGGGCTC AGCCTGCCCT AAATGTAAAA CGTCGATTAA GCCTTGGCAT AATTTCCCCC TATTAGGCTG GCTAATGCTC AAGGGAAAAT GCGCCGCCTG TCAAGCAGCG ATTTCAGCCC GCTACCCTAT TATTGAATTC ATCACAGGGC TACTTATCGC GACTTTAGCT TGGCATTTTG GTCCAAGCTG GCAGTTTGTT TTTGCGAGCA TACTCACCTT TGTGCTTGTA GCACTGACAG CTATCGATCT TGATGAGATG CTGCTCCCCG ACCAGATGAC GTTGCCGTTA CTTTGGCTAG GCTTGATAAT CAACCTAAAT CATACCTTTG CGAGTCCAAC CGACGCCATT ATGGGTGCGG CAGCAGGCTA TTTAAGCTTG TGGTCTATTT TTTGGCTATT TAAGATCCTC ACCGGCAAGG AAGGCATGGG TTATGGTGAC TTTAAACTGC TAGCCGTGTT CGGTGCTTGG CTTGGCTGGC AAATGCTGCC GCTGGTGATT TTACTTTCGT CCCTCGTTGG CGCAGTCGTT GGCATCACTA TGATTGTTAG TAAACGCCTG AAACAAGGGA ATCCAATCCC ATTTGGCCCC TATATTGCCG CAGCTGGCTG GATAGCCTTG CTATTTGGGC AACAGATTGT CGATTGGTAC CTATCGACAC TGTAA
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Protein sequence | MSEFISLLGQ HPYLFIALSF IFAATIGSFL NVVIHRFPVM MKREWQQECN QYLQEYHEDI VNKIGINQLN KPIDAFPEKY NLVVPGSACP KCKTSIKPWH NFPLLGWLML KGKCAACQAA ISARYPIIEF ITGLLIATLA WHFGPSWQFV FASILTFVLV ALTAIDLDEM LLPDQMTLPL LWLGLIINLN HTFASPTDAI MGAAAGYLSL WSIFWLFKIL TGKEGMGYGD FKLLAVFGAW LGWQMLPLVI LLSSLVGAVV GITMIVSKRL KQGNPIPFGP YIAAAGWIAL LFGQQIVDWY LSTL
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