| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal_3835 |
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| Symbol | |
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| ID | 4843964 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS155 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009052 |
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| Strand | - |
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| Start bp | 4507309 |
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| End bp | 4508988 |
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| Gene Length | 1680 bp |
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| Protein Length | 559 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640121099 |
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| Product | pilus (MSHA type) biogenesis protein MshL |
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| Protein accession | YP_001052175 |
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| Protein GI | 126176026 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1450] Type II secretory pathway, component PulD |
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| TIGRFAM ID | [TIGR02519] pilus (MSHA type) biogenesis protein MshL |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.139484 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGCGA TTAAATACTT TACACCTCTG CTCTCACTTT GCCTTGTGGC GTGTCAGACC
ACAAACAGGC CACAGCCGGA GGCGAGTAAG GCGGAATTAG CGGCCTCAAT GGCGACGGCT
ACAGCATCAA CGACGCCACC GCCTGCGACT ATGCCGGATG CGGTTCAGCG AGAATTGAAT
TCGGGCGCTT TACTGTCAGG TTTAACCCCT GCGCTGGAAA CTGAGCGTCG TTTTGATGTC
TCTGCCCATG ATGTGGATGC CAAAGTATTT TTTCCAAGCT TAGTCCAAGG TACGCCGCTG
AGTGTTGCCG TGCATCCTGA TGTGCAAGGT ACGATTTCGC TATCCCTTAA AGGTGTAACC
TTAAGCGAAG CGATTCAAGT GGTTGAAGAT ATCTACGGTT ACGAAGTGAG CCGTGAAGGG
CGTATTCTAA GAGTCTTCCC CGCTGGAATG CGTACTGAGA CTTTCCCGCT GAATTATCTT
TATATGGAGC GCGACGGCTT ATCAGTGACC TCAGTGAGTT CTGGACGCAT TTCCGATAGC
AATAATTCCA ATAGTAATTC GAGCAATAAC AACTCAAATA ACAGTGGTTC GAGTAATAAT
AATTCCAACA GCAGTAATGG TAGTAACTCC AGCAGCAATG GCAGCAGCGA TAGCAGTAAC
GGTACCTTTA TCCGCTCGCG CACTAAGACT GATTTTTGGG GCGAGCTAAA AGAAACGCTG
ACGGCGATTA TTGGTGACAC AGGTAATGGG CGGCAAGTGG TGGTCACACC GCAGGCGGGT
TTAGTGACCA TTCGTGCTTT CCCAAGTGAA TTACGCCAAG TTCGCACTTT CTTAAATTCT
GCCGAGAGTC ATCTGCAGCG CCAAGTGATC TTGGAGGCTA AGATCATCGA AGTCACTTTA
TCTGATGGCT ATCAGCAGGG CATCCAATGG GACAATGTTC TTGGTCATGT TGGCAATACG
AATGTGAATT TTGGGACTTC GAAAGGCCCT GGTTTAAGCG ATAAAATCAC CTCGGCGATT
GGTGGCGTGA CCTCGCTAAG CATTAAAGGC TCCGACTTTA CGACCATGAT CAATCTGTTA
GATACCCAAG GCGATGTGGA TGTATTGTCT AGCCCAAGGG TGACTGCATC GAATAACCAA
AAAGCGGTGA TTAAAGTCGG TACTGATGAG TACTTTGTCA CTGACGTTTC ATCGACGACA
GTTGGTGGCA CGCCGCCTGT GACCACTCCG CAAGTCGAGC TTACGCCGTT TTTCTCAGGC
ATTGCCTTAG ATGTCACGCC GCAAATTGAT AGTGACGGCA ATGTGTTATT GCACGTGCAT
CCATCCGTTA TCGATGTGAA AGAGCAGACT AAAGACATCA AAGTGAGTGA CGCTTCGTTG
GAGCTACCGT TAGCACAGAG TGAAATTCGC GAGTCTGATA CCGTTATCCG CGCCGCTTCC
GGTGACGTGG TCATCATCGG TGGCTTGATG AAGAGTGAAA GCATTGAAGT GGTATCGCAA
GTGCCTTTGT TGGGTGATAT TCCCTACCTC GGTGAATTGT TTAAAAACCG TAGCAAGCAA
AAGAAAAAAA CCGAGCTGAT TATTCTGTTA AAACCTACGG TAGTGGGCGT CGATACGTGG
AAAACTGAGC TACAACGTTC TAAGACATTA TTAGATCGTT GGTATCCGGA GACAAAGTAA
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| Protein sequence | MKAIKYFTPL LSLCLVACQT TNRPQPEASK AELAASMATA TASTTPPPAT MPDAVQRELN
SGALLSGLTP ALETERRFDV SAHDVDAKVF FPSLVQGTPL SVAVHPDVQG TISLSLKGVT
LSEAIQVVED IYGYEVSREG RILRVFPAGM RTETFPLNYL YMERDGLSVT SVSSGRISDS
NNSNSNSSNN NSNNSGSSNN NSNSSNGSNS SSNGSSDSSN GTFIRSRTKT DFWGELKETL
TAIIGDTGNG RQVVVTPQAG LVTIRAFPSE LRQVRTFLNS AESHLQRQVI LEAKIIEVTL
SDGYQQGIQW DNVLGHVGNT NVNFGTSKGP GLSDKITSAI GGVTSLSIKG SDFTTMINLL
DTQGDVDVLS SPRVTASNNQ KAVIKVGTDE YFVTDVSSTT VGGTPPVTTP QVELTPFFSG
IALDVTPQID SDGNVLLHVH PSVIDVKEQT KDIKVSDASL ELPLAQSEIR ESDTVIRAAS
GDVVIIGGLM KSESIEVVSQ VPLLGDIPYL GELFKNRSKQ KKKTELIILL KPTVVGVDTW
KTELQRSKTL LDRWYPETK
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