| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal_3832 |
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| Symbol | |
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| ID | 4845874 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS155 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009052 |
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| Strand | - |
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| Start bp | 4503300 |
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| End bp | 4505060 |
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| Gene Length | 1761 bp |
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| Protein Length | 586 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640121096 |
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| Product | type II secretion system protein E |
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| Protein accession | YP_001052172 |
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| Protein GI | 126176023 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2804] Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0461846 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACCCA GATTAAAAAT GCGTTTGGGC GATCTGTTAG TTCAAGAAGC CATTATTACC
GAAGCGCAGT TGCAACAGGC GTTAGGCGAG CAGCGTAATA CGGGCAAAAA ACTGGGTCGT
ACCCTCATTG ATCTGCAATC GATTACTGAG CATCAGTTGT TGCAGTTCTT GTCGCAGCAA
TTGAATGTGC CTTTGCTTGA TATCAGTAAA ATGCCGATCC CAGCGGAAGT CGTGCATCTT
ATTCCTGAGG TGCAAGCCCG ACGTTTCCGC GCTTTAGCGG TTGAAGACAG GGGCGATAGC
GTACTGGTCG CTATGAGTGA TCCTACCGAT TTGCAGGCGC TCGATCACCT CGAAATGCTT
ATCGCACCTA AGCGTTTGAA GTTAGCGGTA GCGCCCGAGC AGCAACTGCT GCAAGCGTTT
GATAACTTAT ATCGCCGTAC AGACCAAATT GCTCAGATCG CCGGTAAGCT CGAAGAAGAA
TACGCCGCCG ATGAGATGTT CGATTTAGCC AGTCTGACTT CGGGTGACAG TGACAATGAA
ACCACAGTGG TTAAGTTGCT ACAGTCGATT TTTGAGGATG CGGTGCAAAT GCGCGCCTCG
GATATCCATA TCGAACCCGG TGATAAAGCC CTACGTATTC GCCAGCGTAT CGATGGCCAG
CTACACGAAA CGATTCTGAA TGAAGTTAAT ATTGCCGCGG CTTTAGTATT GCGACTTAAG
TTGATGGCTG GACTCGATAT TTCTGAAAAA CGTTTGCCGC AGGATGGCCG TTTCCACATG
GAAATCAAAG GTCACCATAT CGATGTGCGT ATGTCGACTA TGCCGATTTA CCACGGTGAA
TCTGTGGTAA TGCGTTTACT CGACCAATCG GCGGGGTTAT TGACCCTAAA CGAAACCGGT
ATGCCGCCTG CTATTTTGGC GCGTATTCGT AAACAGATTA AACGCCCCCA CGGCATGTTG
TTGGTCACTG GTCCCACGGG TAGCGGTAAA ACCACCACCT TGTACGGTAT TTTGAGCGAG
CTCAATACCG CCGACCGTAA GATCATCACA GTGGAAGATC CGGTCGAGTA TCAATTGCCA
CGGATCAACC AAGTACAAGT TAACCATAAG ATTGGCTTAA ACTTTTCCAA CGTATTGCGA
ACTACCTTAC GTCAAGACCC CGATATCATC ATGGTAGGGG AAATGCGTGA CCAAGAAACC
GTTGAGATTG GCCTGAGGGG CGCATTAACG GGTCACTTTG TGCTATCGAC CTTGCACACT
AACGATGCGG TCACCAGTGC GCTGCGTTTA CTCGATATGG GCGCTGCGAG TTATTTAGTT
GCCAGTGCCT TAAGGGTGAT TATTGCCCAG CGTTTAGTGC GCCGCGTGTG CCATAACTGT
GGTGTTGAGT ATCAGCCGAC ATCGCAGGAA AAAGCCTGGC TGAGTAGCGT GAGTCGTAAA
GATTTTACCC ATGCAAACTT TAGAATCGGT ACCGGTTGCC AGAGTTGTAA CGGCAGTGGT
TATCGTGGTC GTATTGGTAT TTTTGAGATC CTCGAGCTCG ACGAAAAGAT GATCGATGCG
ATGCGTACCG GTAATCCGCA GGATTTTGCC AGAGCCGCGT TGCAGAGCCC GAATTTTACT
CCGCTCGCCG AGTCAGCGTT GCAATATTTG AGCGAAGGCA TGACGACCAT TGAAGAGGTG
GCTAAGCTGG TAGAGGATGT GAGTGAATCA CAGATACCTT TGTCGAAGGA TATTATTAGC
CAACAAGGCG TTGAGGCGTA A
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| Protein sequence | MKPRLKMRLG DLLVQEAIIT EAQLQQALGE QRNTGKKLGR TLIDLQSITE HQLLQFLSQQ
LNVPLLDISK MPIPAEVVHL IPEVQARRFR ALAVEDRGDS VLVAMSDPTD LQALDHLEML
IAPKRLKLAV APEQQLLQAF DNLYRRTDQI AQIAGKLEEE YAADEMFDLA SLTSGDSDNE
TTVVKLLQSI FEDAVQMRAS DIHIEPGDKA LRIRQRIDGQ LHETILNEVN IAAALVLRLK
LMAGLDISEK RLPQDGRFHM EIKGHHIDVR MSTMPIYHGE SVVMRLLDQS AGLLTLNETG
MPPAILARIR KQIKRPHGML LVTGPTGSGK TTTLYGILSE LNTADRKIIT VEDPVEYQLP
RINQVQVNHK IGLNFSNVLR TTLRQDPDII MVGEMRDQET VEIGLRGALT GHFVLSTLHT
NDAVTSALRL LDMGAASYLV ASALRVIIAQ RLVRRVCHNC GVEYQPTSQE KAWLSSVSRK
DFTHANFRIG TGCQSCNGSG YRGRIGIFEI LELDEKMIDA MRTGNPQDFA RAALQSPNFT
PLAESALQYL SEGMTTIEEV AKLVEDVSES QIPLSKDIIS QQGVEA
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