Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal_3812 |
Symbol | |
ID | 4841596 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS155 |
Kingdom | Bacteria |
Replicon accession | NC_009052 |
Strand | - |
Start bp | 4477198 |
End bp | 4478490 |
Gene Length | 1293 bp |
Protein Length | 430 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640121076 |
Product | ABC-2 type transporter |
Protein accession | YP_001052152 |
Protein GI | 126176003 |
COG category | [V] Defense mechanisms |
COG ID | [COG0842] ABC-type multidrug transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.188014 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGACTGAAC GCACGCCCAA CGCTAACACA GTCGACAAGA CTAAAGCTGA ATCACAGCCA TCGAGTAGAA GCTTTATGGC CTTGCTCATC GCGTTAATTC GCCGTGAGCT TAGTGCCCTG TGGCGCGATC CTTGGCAGTT GGCGCTGATC AGTTATATTC CGCTGATCGG GATTTTCTGC CTGTGGTGGC TATTCAGTGC AGGCTTACCG AGGCAACTGC CGGTGGCGAT TGTCGATCAA GACCACAGTC AATTAAGCCG TATGCTGACC CGTCAGCTGA AGGCAAATCC TGTGACAGAG CCACAGAATT TCACCGATTT AGCCGCGGCG GTGTCGGCGA TGCAGCAGGC GAAAGTCTAC GCTATCGTGG TCTTTCCCTA TGATATGAAA AAAGATTTGC TCACTGGCCA CAAGCCCACC ATAGATGTGC GCTACAACAG CCAATTTTTG CTGGTGGGCA AGTTACTCTC AAGCCAAATT CAGTTGAGTC TGGGTGATGG TTTGTTGCAA GTCGCGGGCT TAAAACAGCT CGCCAACGGT ACACCTAAAT CCCAAGTGGC AGTCAATTTA AGCCCAATCA AAAGCCAAAC AACGGCTTTG TTTAACCGAA ATAACAACTA TATAGGCTTT TTAGTGCCGC CAGTGCTCGT TGCGCTGTGG CAATTATTAT CTATGTTGGT CATGGCTAAC AGCTTAAATC GAGAGCTGCA TTTAGCGCCC ACGACTCAGG TCAATGGCAT ATCGAATACC TTAACCGAGC ATTTTTGGCC TAAAGTGCTG GCGAAATTGG TGTTGTTTAC GCCGATATTG ATGCTGCAGG GCGGCTTTAT TTTAACTTGG CTGTACTTGT ATCTCGCGTT GCCGATGGCG GGTAGTTTAG CCCTATTGCT GTTAGCGCAA TTAGTGATGT TGCTGGCGGT CTGGAGTGTG GTGTTATTAA TCTTTGTGGT AATGCGTGAC AGTGCGCGGG TCATCAGTTT TTGCACAGCC TTATTTGCGC CCGCCTTTGC CTTTATGGGG ATCACTTTTC CCACCCATGA TATGCCGCAA TTGGCGCAGT GGTGGCGACA GATAATGCCG TCGAGCCACT ATATTGAGTC CCATGTGAGT GTCGTCAGTT ACGGCGCTGC TTGGCCGAAT GTGGCGATCC AACTCAGCAG TTATTGGGGC TTTATCTGTT TGCTGCCTTT GATATATTTG TTATCGCGTA AATTACTGCC CATCACAGTC AACGCTAACA CTATCGTGAC AGCATATGAC TCGGACGCAG CCTTACCTGC GAAGGGGCAA TAG
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Protein sequence | MTERTPNANT VDKTKAESQP SSRSFMALLI ALIRRELSAL WRDPWQLALI SYIPLIGIFC LWWLFSAGLP RQLPVAIVDQ DHSQLSRMLT RQLKANPVTE PQNFTDLAAA VSAMQQAKVY AIVVFPYDMK KDLLTGHKPT IDVRYNSQFL LVGKLLSSQI QLSLGDGLLQ VAGLKQLANG TPKSQVAVNL SPIKSQTTAL FNRNNNYIGF LVPPVLVALW QLLSMLVMAN SLNRELHLAP TTQVNGISNT LTEHFWPKVL AKLVLFTPIL MLQGGFILTW LYLYLALPMA GSLALLLLAQ LVMLLAVWSV VLLIFVVMRD SARVISFCTA LFAPAFAFMG ITFPTHDMPQ LAQWWRQIMP SSHYIESHVS VVSYGAAWPN VAIQLSSYWG FICLLPLIYL LSRKLLPITV NANTIVTAYD SDAALPAKGQ
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