| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal_3775 |
|---|
| Symbol | metL |
|---|
| ID | 4842374 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS155 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009052 |
|---|
| Strand | - |
|---|
| Start bp | 4431674 |
|---|
| End bp | 4434067 |
|---|
| Gene Length | 2394 bp |
|---|
| Protein Length | 797 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 640121041 |
|---|
| Product | bifunctional aspartate kinase II/homoserine dehydrogenase II |
|---|
| Protein accession | YP_001052117 |
|---|
| Protein GI | 126175968 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0460] Homoserine dehydrogenase
[COG0527] Aspartokinases |
|---|
| TIGRFAM ID | [TIGR00657] aspartate kinase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCACGTT GTCACTTACA TAAATTTGGT GGCTCCAGTT TAGCGGATGC CGATTGTTAT
CGCCGAGTCG CCCATATCCT GTTAACCCAC GGTCATAGCG ATGACCTTGT GGTGGTCTCT
GCGGCGGGTA AGAGCACGAA TTTCCTGTAT AAATTATTAG CGCTGCGCGA CGTGGGTCAG
TTGTGGCAAG AAGAATTACA AGTGCTGACC AGCTATCAAC AGGGGTTGGT AGAGCAGTTA
TTGTCGAACG AACAAGCCCG CGATCTGCGT GAGCGTTTGG CGACAGATCA GGCGCAGCTC
ATCAGTTTAT TGTCCCTCGA TGAACGCAAC GAATACCAAG TTAACCATGT GGTGAGCTTT
GGCGAGCGTT GGTCGGCGCG CTTGATGGCG GCGCTGCTGC GCGAATCTGG TGTGGCGGCA
AGCCATGTGG ATGCCTGTTC AATTTTAGTG GCCGATGAAG CCGCCGTGCC ACAAATTCGG
GTGCAGGAAT CCCGCGCAAA AGTACAAGCG CTGTTGGCCG CCCACCCAAA TGAACGACTA
GTGATCACAG GCTTTATCTG CGCTAACGAG CGTGGCGATA CTTTATTACT TGGTCGTAAT
GGTTCCGATT TTAGCGCTAG CTTGATTGCC AGCCTTGCCG ATATTGAGCG CGTGACCATT
TGGACCGATG TGGAAGGGGT GTTCAACGCT GACCCGAATA AAATCAACGA TGCTAAATTA
CTAAAAAGCA TGTCACTTGC CGAAGCTGAC CGCTTAGCGC GTTTAGGCTC GCCGGTATTG
CATTCGCGCA CTTTGCAGCC TCTGTTTAAT ACCGAAGTGA GTTTAGCGGT GCGCTCAAGT
TATGCATCGC ACACCGACTT TACCTTGATT GCGCCCCACA GTTCGTCGGC GAGCGCGCCT
GTGGTGACTA ACCTCAATGC TGTTGTCCTG TTCGGCTTTA AGCTCACGGG CGAATTAACA
AGCTTACTAG ATTCGTTGAT CGCCGCAGGT TTAACGCCAT TGGCCCATTG GACCTCAGCC
CATCAAAGGG TTGAGCTTGC CTATACCGCT GAAAATCAAA AACAAGTACA AAGATTACTC
GACGCCGAGG CACAAGTATT AGGGATCAGC GATCAGCAGA TCAACACAGA TCTCGGCCTA
GTGGCGTTAG TCAGTGCCGA TGCCGAACAT TATCGCCGCA GCTTCGCCCG TTTATTAAGT
CGTGACGCTA AACCTTTGTT TAGTGGCGAC TTAAGCTTAG TGACGCTGGT GCCTCAGTCG
CAGGTGAATC TGTTAACGCA AAAGGTCCAC CGTCGCTGCG CTGGGCCGCG TAAACGCATT
GGTGTCTTAC TGCTCGGCGT GGGCAACATA GGTGAGGCTT GGGTCGATTT GTTTAAGTCG
GTGTCGCCAT CACTGGATCA TGAACTCGAA GCTAGCGTTG AGTTAGTCGG CTTAGTCAGT
TCGAGTAAAG CCTTGATTAA ATCCACAGGC ATTAATCTTG CCGCGTGGCA GACTGAGTTT
AATACCGAGG CAACACCTTG GCAGTACGAG CACTTGTTCG AGCAATTAGA ACGGGTTAAC
TGCGATGAGC TGGTGGCCTT AGATATCAGT GCCAGCGCCA GTTTGACGCT GCAATATCCA
GAGCTATTCG AGCGCGGCAT CCATGTGGTG AGCGCGAATA AACTCGCAGG CTCGGGTCCA
CTGCCTTTTT ACCGTGAGTT AAAGCAGCAA CTGGGTAATC GTCGTTTATT TTGGCGCTAT
AACGCCAGTT GCGGCGCAGG TTTGCCTATC CAACATGCGT TAAATGATCT GCGTAACAGC
GGTGATAGCG TTGAAGCCGT GGGCGGGATT TTCTCTGGCA CCTTGTGTTG GTTGTTTGAG
AAATACGATA CCAGCAAGCC TTTCTCTGAG TTAGTGATTG AAGCCAGAGG CTTAGGTATC
ACTGAGCCCG ATCCCCGCGA CGATCTGTCC GGTCGTGATA TGCAGCGTAA ACTGCTCATT
TTGGCCCGTG AAATTGGCCT TGAAATCGAG CTTGAAGATA TTGAACTGCG CTCATTAGTG
CCAGCCGATT TGGCCGATAT TCCCTTAGAT CAATTTCTTG CCCGCATTGC CGAGTTAGAT
GCCGATCTGC TGCAACAATA CGGTGCGGCG GCGGAGCAAA ATAAGGTGCT CAGATACGTG
GCATCCTTAG ATAACAGCGG CCCAGAGCTT AAAGCTGAAG TCGGTTTGCA ATGGATTGAT
GCCCATCATC CCTACGCTAA TTTGACTCCA GGCGATAACG TGTTTGTGAT CCGCAGCGTC
TTCTATCAAG GTAACCCGTT GATCATCCGT GGACCGGGCG CCGGACGCGA AGTGACAGCG
GCGGCCGTGC AGTCGGATCT GACGCAGATC TGTCGCGATC TCTTGCAAGA GTAG
|
|---|
| Protein sequence | MARCHLHKFG GSSLADADCY RRVAHILLTH GHSDDLVVVS AAGKSTNFLY KLLALRDVGQ
LWQEELQVLT SYQQGLVEQL LSNEQARDLR ERLATDQAQL ISLLSLDERN EYQVNHVVSF
GERWSARLMA ALLRESGVAA SHVDACSILV ADEAAVPQIR VQESRAKVQA LLAAHPNERL
VITGFICANE RGDTLLLGRN GSDFSASLIA SLADIERVTI WTDVEGVFNA DPNKINDAKL
LKSMSLAEAD RLARLGSPVL HSRTLQPLFN TEVSLAVRSS YASHTDFTLI APHSSSASAP
VVTNLNAVVL FGFKLTGELT SLLDSLIAAG LTPLAHWTSA HQRVELAYTA ENQKQVQRLL
DAEAQVLGIS DQQINTDLGL VALVSADAEH YRRSFARLLS RDAKPLFSGD LSLVTLVPQS
QVNLLTQKVH RRCAGPRKRI GVLLLGVGNI GEAWVDLFKS VSPSLDHELE ASVELVGLVS
SSKALIKSTG INLAAWQTEF NTEATPWQYE HLFEQLERVN CDELVALDIS ASASLTLQYP
ELFERGIHVV SANKLAGSGP LPFYRELKQQ LGNRRLFWRY NASCGAGLPI QHALNDLRNS
GDSVEAVGGI FSGTLCWLFE KYDTSKPFSE LVIEARGLGI TEPDPRDDLS GRDMQRKLLI
LAREIGLEIE LEDIELRSLV PADLADIPLD QFLARIAELD ADLLQQYGAA AEQNKVLRYV
ASLDNSGPEL KAEVGLQWID AHHPYANLTP GDNVFVIRSV FYQGNPLIIR GPGAGREVTA
AAVQSDLTQI CRDLLQE
|
|---|
| |