Gene Sbal_3573 details

Gene Information

• Locus tag: Sbal_3573
• ID: 4845632
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella baltica OS155
• Kingdom: Bacteria
• Replicon accession: NC_009052
• Strand: -
• Start bp: 4200009
• End bp: 4201895
• Gene Length: 1887 bp
• Protein Length: 628 aa
• Translation table: 11
• GC content: 48%
• IMG OID: 640120842
• Product: DNA topoisomerase IV subunit B
• Protein accession: YP_001051918
• Protein GI: 126175769
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0187] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit
• TIGRFAM ID: [TIGR01055] DNA topoisomerase IV, B subunit, proteobacterial

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACGAATC AATACACCTC TGACGCCATT GAAGTTCTCA ACGGACTCGA TCCTGTTAAA 
CGCCGTCCAG GTATGTATAC CGACACCTCC AGACCGAACC ATTTGGGCCA AGAGGTCATA 
GACAACAGTG TCGATGAAGC ATTAGCGGGC CACGCGACCA AAATTGAAGT TGTTCTACAT 
ACAGATAACT CCCTCGAAGT CACCGATGAT GGCCGTGGAA TGCCGGTGGA TATCCACCCT 
GAAGAAGGCA TTCCTGGGGT CGAGTTAATC CTGACCAAAT TACATGCTGG CGGTAAATTT 
TCGAATAAAA ACTACCAGTT CTCTGGCGGT TTGCATGGCG TGGGGATTTC TGTCGTTAAC 
GCTCTGTCGC GCCGTGTTGA AGTGACAGTT CGCCGTGATG GCCAAGTGTA TGATATCGCA 
TTTGAAAATG GCTTTAAGGT TGAAGAGTTA CGCCCAACGG GAACTTGTGG TCGTCGCAAT 
ACCGGAACAC GAGTGCATTT TTGGCCCGAC GCCAGCTATT TTGATTCGGC TAACTTCTCA 
AATTCAAAAC TGATTTATCT GCTGCGGGCT AAAGCGGTAC TGTGCCCAGG CTTACGGATT 
AAATTCACCA ACAAACAGAC AAATGAAGTC CATGAATGGT TCTATGAAAG CGGCCTAACC 
GATTATTTGA AGGCGGCGAT TGGCGATAAT TTAAGGTTGC CAGATGAGCC GTTTGTCGGC 
TGTTTTAAGG GCCAGCTAGA AGCCGCTGAT TGGGCGATTA CTTGGTTGCC AGAAGGCGGT 
GAATCCATTG GCGAAAGTTA TGTTAACTTA ATTCCGACTC CGCTCGGTGG TACCCATGTG 
AATGGTTTCC GCCAAGGCTT ATTGGAGTCA ATGCGCGAAT TTTGTGAGTT CAGAAACTTA 
ATTCCCCGCG GCATTAAACT TTCACCCGAA GACATTTGGG ATCGCGCCGC ATTTATATTG 
TCGGTGAAGA TGCAAGAACC GCAGTTTGCT GGCCAAACCA AGGAAAAGCT TTCGAGCCGT 
CAATGCGCCG CATTTGTGTC TGGCGTCGTG CGTGATGCCT TTTCACTCTG GTTGAACTCA 
AATACTGAAC TCGCTGAATC GTTAGCCGAA ATGTGCATTA ATAATGCCCA GAGTCGGTTA 
AAGGCCGCTA AAAAAGTTGC TCGTAAAAAG GTGACTTCAG GGCCTGCACT GCCGGGTAAG 
CTAACGGACT GTAGTGGCCA AGATCCAATG CGCGGAGAGT TATTCCTCGT GGAAGGGGAT 
TCTGCTGGCG GTAGCGCTAA ACAGGCTCGC GATCGTGAGT TTCAAGCCAT CATGCCGCTG 
CGTGGGAAAA TCTTAAACAC TTGGGAAGTT GATGCTTCCC AAGTATTAGC TTCGCAGGAA 
GTCCATGATA TTTCGGTCGC AATTGGTTGC GATCCCGATA GTAGTGATAT TTCAGAACTA 
CGTTATGGCA AGATTTGTAT CCTTGCGGAT GCCGACTCGG ACGGACTGCA CATTGCTACC 
TTGTTATGCG CGCTATTTTT GAAGCATTAC CGTATCTTGG TTGAACAGGG TCATGTGTAT 
ATTGCCATGC CGCCGTTGTT CCGTATCGAT ATCGGCAAAG AGGTGTATTA CGCCTTAGAT 
GAGGCCGAAA GAGCGGGGAT TTTAGATCGC ATTGCCGCTG AGAATAAAAA GGGTAAGGTA 
CAAGTCACCC GCTTTAAAGG GTTGGGTGAG ATGAATCCTT TACAACTTCG TGAAACAACG 
ATGGATCCGA ACACCCGTCG TTTAGTACAG TTGACCATAG ATGATATCGA AGAGACTGAT 
GCTTTGATGG ATATGTTGCT CGCTAAGAAG CGTTCGCCGG ACCGTAAAAA CTGGCTTGAA 
GATAAGGGTG ACATGGCTTT ACTTTAA 

 

Protein sequence

MTNQYTSDAI EVLNGLDPVK RRPGMYTDTS RPNHLGQEVI DNSVDEALAG HATKIEVVLH 
TDNSLEVTDD GRGMPVDIHP EEGIPGVELI LTKLHAGGKF SNKNYQFSGG LHGVGISVVN 
ALSRRVEVTV RRDGQVYDIA FENGFKVEEL RPTGTCGRRN TGTRVHFWPD ASYFDSANFS 
NSKLIYLLRA KAVLCPGLRI KFTNKQTNEV HEWFYESGLT DYLKAAIGDN LRLPDEPFVG 
CFKGQLEAAD WAITWLPEGG ESIGESYVNL IPTPLGGTHV NGFRQGLLES MREFCEFRNL 
IPRGIKLSPE DIWDRAAFIL SVKMQEPQFA GQTKEKLSSR QCAAFVSGVV RDAFSLWLNS 
NTELAESLAE MCINNAQSRL KAAKKVARKK VTSGPALPGK LTDCSGQDPM RGELFLVEGD 
SAGGSAKQAR DREFQAIMPL RGKILNTWEV DASQVLASQE VHDISVAIGC DPDSSDISEL 
RYGKICILAD ADSDGLHIAT LLCALFLKHY RILVEQGHVY IAMPPLFRID IGKEVYYALD 
EAERAGILDR IAAENKKGKV QVTRFKGLGE MNPLQLRETT MDPNTRRLVQ LTIDDIEETD 
ALMDMLLAKK RSPDRKNWLE DKGDMALL