Gene Sbal_3507 details

Gene Information

• Locus tag: Sbal_3507
• ID: 4845755
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella baltica OS155
• Kingdom: Bacteria
• Replicon accession: NC_009052
• Strand: +
• Start bp: 4112983
• End bp: 4113693
• Gene Length: 711 bp
• Protein Length: 236 aa
• Translation table: 11
• GC content: 51%
• IMG OID: 640120772
• Product: ABC transporter related
• Protein accession: YP_001051853
• Protein GI: 126175704
• COG category: [V] Defense mechanisms
• COG ID: [COG1136] ABC-type antimicrobial peptide transport system, ATPase component

Plasmid Coverage information

• Num covering plasmid clones: 30
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCCGACG TCGCTAAACC AAATCCTGTC GACAAGCTTC ACCCAGTCGC CAAGCTTAAC 
CAAGTCAGCA AGTGCTTTCG TGATGGCGAG CAATATCATC AAGTGCTGCA AGCGGTTGAC 
CTGCAGATCC ATAGAGGCGA AACCGTGGCA CTCACAGGTC CCAGCGGCAG CGGCAAGAGC 
ACCTTACTCA ACCTGATCGC CGGTTTTGAA ATGCCAGACT CGGGCGAAAT CTTACTAGAA 
CAAGCGTCCA CCTCAACTTG GCAAGACAAA GATTGGAGCC GTTTCAGGCG CAATTCCTTA 
GGTGTCGTGT TTCAGCAATT TAACTTACTC ACGCCACTCA ACGTGAAAGA CAATATCGCC 
TTCTCCTTAA GTTTAACCGC GCAGCCGTGG TCTGCCTGGT GTGACTATCT GGTTGAAAAA 
CTTGGGCTGA TGCCATTACT TCACCGCCAA GTTGAAGCCC TGTCCGGCGG TCAACAACAG 
CGCGTCGCCA TCGCCCGCGC CTTAGCCCAT AAACCGACAT TGCTACTTGC CGACGAACCC 
ACAGGTAACT TAGATGATGT ATCGGGTAAG CAAGTCATGG CATTACTGTG TGAACTGGCA 
CGGGAAAGCC AAACCAGTAT CTTAATGGTT ACCCACAGTG AAGAGTGCGC CGCCTTCATG 
CAAAAACGTT GGCACTTATC CCAAGGTGCA GTCGCTATCT ATGAACAATA A 

 

Protein sequence

MADVAKPNPV DKLHPVAKLN QVSKCFRDGE QYHQVLQAVD LQIHRGETVA LTGPSGSGKS 
TLLNLIAGFE MPDSGEILLE QASTSTWQDK DWSRFRRNSL GVVFQQFNLL TPLNVKDNIA 
FSLSLTAQPW SAWCDYLVEK LGLMPLLHRQ VEALSGGQQQ RVAIARALAH KPTLLLADEP 
TGNLDDVSGK QVMALLCELA RESQTSILMV THSEECAAFM QKRWHLSQGA VAIYEQ