| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal_3458 |
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| Symbol | |
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| ID | 4844657 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS155 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009052 |
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| Strand | + |
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| Start bp | 4053970 |
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| End bp | 4057164 |
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| Gene Length | 3195 bp |
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| Protein Length | 1064 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640120723 |
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| Product | bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase |
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| Protein accession | YP_001051804 |
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| Protein GI | 126175655 |
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| COG category | [C] Energy production and conversion
[E] Amino acid transport and metabolism |
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| COG ID | [COG0506] Proline dehydrogenase
[COG4230] Delta 1-pyrroline-5-carboxylate dehydrogenase |
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| TIGRFAM ID | [TIGR01238] delta-1-pyrroline-5-carboxylate dehydrogenase (PutA C-terminal domain) |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00916432 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAGCGA TAACTATGTT CAAAGCGAGT GAAGTGCTGG CAGGCCGCTA CGATTCTGCC
AATCTCGACG AACTGTTCAA AGCGATCAGC GACAACTACA TTGTCGATGA AGAACAATAC
TTGTCAGAGT TGATCCAACT AGTTCCCTCC AGTGATGAAG CCATAGAGCG CGTCACTCGT
CGTGCCCACG AACTGGTTAA CAAGGTTCGT CAATTCGATA AAAAAGGTTT GATGGTTGGC
ATAGATGCCT TCCTGCAACA GTACAGCTTA GAAACACAGG AAGGCATTAT CCTGATGTGT
TTAGCCGAAG CGCTGCTGCG TATTCCTGAT GCGGCCACTG CCGATGCACT GATTGAAGAC
AAGCTTTCAG GCGCTAAGTG GGATGAGCAC ATGAGTAAGA GTGATTCTGT ACTCGTTAAC
GCATCGACCT GGGGCCTTAT GCTCACGGGT AAAATTGTCA AGCTCGATAA AAAAATCGAT
GGCACCCCAA GCAACTTACT GAGCCGCTTA GTTAATCGTC TCGGCGAGCC AGTGATCCGC
CAAGCAATGA TGGCCGCGAT GAAGATCATG GGTAAGCAGT TTGTGCTGGG CCGCAACATG
AAAGAAGCCC TGAAGAACAG TGAAGACAAG CGTAAGTTAG GCTATACCCA TTCCTACGAC
ATGCTGGGCG AAGCGGCGTT AACGCGTAAA GATGCTGAGA AATACTATAC CGATTACGCC
AATGCGATCA CTGAGCTCGG TGCTCAAAGC TATAACGAAA ATGAATCACC GCGCCCAACG
ATTTCAATCA AGCTATCGGC ATTGCACCCA CGTTACGAAG TGGCCAATGA AGACCGCGTT
TTAACTGAAC TGTACGACAC AGTTATCCGC CTGATTACAC TGGCTCGCGG CTTAAATATC
GGTATTTCTA TCGATGCTGA AGAAGTCGAT CGCCTCGAGT TGTCACTGAA ACTGTTCCAA
AAACTATTTA ATTCAGAAGC GGCAAAAGGC TGGGGATTAC TCGGTATTGT GGTTCAAGCT
TACTCTAAGC GTGCCCTGCC CGTACTGGTT TGGTTAACTC GCCTTGCGAA AGAGCAAGGG
GATGAAATCC CCTTGCGTCT GGTAAAAGGC GCCTATTGGG ATAGCGAACT GAAATGGGCC
CAACAAGCTG GCGAAGCCGC TTACCCACTT TACACTCGCA AAGCCGGTAC TGACGTTTCT
TACCTCGCCT GCGCCCGCTA CTTGTTATCG GATGCGACTC GCGGCGCTAT CTACCCACAA
TTTGCTAGCC ACAATGCGCA AACCGTTGCG GCGATTTCAG ATATGGCGGG AGATCGTCAC
CATGAGTTCC AACGCTTACA CGGCATGGGA CAAGAGCTGT ACGACACGAT TTTGTCGGAA
GCTGGCGCCA AATCGGTACG TATTTATGCG CCCATCGGTG CCCATAAGGA TCTACTGCCC
TACTTAGTGC GTCGTCTGCT GGAAAACGGG GCCAACACTT CGTTCGTCCA CAAGCTCGTT
GATCCTAAAA CCCCAATCGA CTCATTAGTG GTGCATCCGC TAAAAACGCT GACGGGCTAT
AAAACCCTGG CTAACAATAG AATCGTTTTA CCTGCCGATA TTTTCGGTAG TGATCGCAAA
AATTCCAAGG GACTCAATAT GAACATCATT TCCGAATCTG AGCCATTTTT CGCGGCAATA
GAACAGTTTA AAAATACCCA ATGGCAAGCA GGCCCTCTGG TTAACGGCAA AACCTTAACC
GGTGAGCACA AAACCATAGT CAGCCCATAC GACACCACCC AAACAGTGGG TCAAGTAGCC
TTTGCCGATG ATGCGGCCAT AGAACAAGCA CTCGCGTCTG CTGAAGCGGC GTTTGCCTCA
TGGGCACGTA CGCCGGTTGA AACCCGTGCC TCTGCGCTGC AAAAACTCGC TGACTTATTA
GAAGAAAACC GCGAAGAATT GATCGCCTTG TGTACCCGTG AAGCGGGCAA GAGCATTCAA
GACGGTATCG ACGAAGTACG TGAAGCCGTT GATTTCTGTC GTTACTACGC AGTACAAGCC
AAGAAAATGA TGGCGAAGCC TGAACTGCTT CCTGGCCCAA CAGGAGAGCT GAACGAACTG
TTCCTCCAAG GCCGCGGCGT ATTCGTGTGT ATTAGCCCGT GGAACTTCCC ATTGGCCATC
TTCCTCGGCC AAGTGTCTGC GGCATTAGCG GCAGGTAACA CAGTGATCGC GAAACCTGCG
GAGCAAACCT CGATTATTGG TTACCGTGCA GTACAACTTG CTCACCAAGC AGGTATTCCT
GTTGAGGTTC TGCAATTCCT ACCAGGTACG GGTGCGACTG TGGGTAGCGC AATTACAGCC
GATGAACGTA TCGGCGGCGT ATGCTTTACC GGTTCAACTG GCACTGCAAA ACTGATTAAC
CGTACACTGG CCAACCGTGA TGGCGCGATT ATTCCTTTAA TCGCCGAAAC TGGTGGTCAA
AATGCCATGG TAGTGGACTC AACCTCACAA CCTGAGCAAG TGGTTAACGA TGTGGTTTCA
TCGTCATTCA CCAGCGCGGG TCAACGCTGT TCAGCATTGC GCGTACTCTT CCTACAAGAA
GACATCGCCG ATCGCGTGAT CGAAGTGCTG CAAGGCGCGA TGGATGAATT AGTGATTGGC
AACCCAAGCT CAGTGAAAAC TGACGTAGGC CCAGTGATTG ACGCCACCGC CAAAGCCAAC
TTAGATGCGC ACATCGACCA CATAAAGCAA GTCGGCAAGC TTATTAAGCA AATGCCGTTG
CCTGCTGGTA CAGAGAACGG TCACTTCGTT TCACCCACTG CGGTTGAAAT CGATTCGATT
AAAGTGCTTG AGAAAGAACA CTTTGGCCCA ATCCTGCACA TTATTCGCTA CAACGCTGCA
GAGCTAAGCC AAGTGATCAA CGAGATCAAT AGCACAGGCT TTGGCTTAAC CTTAGGCATC
CACAGCCGTA ACGAAGGCCA TGCCCTTGAG GTTGCAGATA AAGTCAACGT GGGTAACGTG
TACATTAACC GTAACCAAAT CGGCGCTGTG GTGGGTGTAC AGCCTTTCGG CGGTCAAGGC
CTGTCAGGCA CTGGTCCTAA AGCCGGTGGC CCACACTACT TAACCCGTTT TGTGACTGAA
AAGACTCGCA CCAACAACAT CACCGCCATA GGTGGTAATG CAACGTTATT GTCACTGGGT
GATGGCGAAG AATAA
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| Protein sequence | MEAITMFKAS EVLAGRYDSA NLDELFKAIS DNYIVDEEQY LSELIQLVPS SDEAIERVTR
RAHELVNKVR QFDKKGLMVG IDAFLQQYSL ETQEGIILMC LAEALLRIPD AATADALIED
KLSGAKWDEH MSKSDSVLVN ASTWGLMLTG KIVKLDKKID GTPSNLLSRL VNRLGEPVIR
QAMMAAMKIM GKQFVLGRNM KEALKNSEDK RKLGYTHSYD MLGEAALTRK DAEKYYTDYA
NAITELGAQS YNENESPRPT ISIKLSALHP RYEVANEDRV LTELYDTVIR LITLARGLNI
GISIDAEEVD RLELSLKLFQ KLFNSEAAKG WGLLGIVVQA YSKRALPVLV WLTRLAKEQG
DEIPLRLVKG AYWDSELKWA QQAGEAAYPL YTRKAGTDVS YLACARYLLS DATRGAIYPQ
FASHNAQTVA AISDMAGDRH HEFQRLHGMG QELYDTILSE AGAKSVRIYA PIGAHKDLLP
YLVRRLLENG ANTSFVHKLV DPKTPIDSLV VHPLKTLTGY KTLANNRIVL PADIFGSDRK
NSKGLNMNII SESEPFFAAI EQFKNTQWQA GPLVNGKTLT GEHKTIVSPY DTTQTVGQVA
FADDAAIEQA LASAEAAFAS WARTPVETRA SALQKLADLL EENREELIAL CTREAGKSIQ
DGIDEVREAV DFCRYYAVQA KKMMAKPELL PGPTGELNEL FLQGRGVFVC ISPWNFPLAI
FLGQVSAALA AGNTVIAKPA EQTSIIGYRA VQLAHQAGIP VEVLQFLPGT GATVGSAITA
DERIGGVCFT GSTGTAKLIN RTLANRDGAI IPLIAETGGQ NAMVVDSTSQ PEQVVNDVVS
SSFTSAGQRC SALRVLFLQE DIADRVIEVL QGAMDELVIG NPSSVKTDVG PVIDATAKAN
LDAHIDHIKQ VGKLIKQMPL PAGTENGHFV SPTAVEIDSI KVLEKEHFGP ILHIIRYNAA
ELSQVINEIN STGFGLTLGI HSRNEGHALE VADKVNVGNV YINRNQIGAV VGVQPFGGQG
LSGTGPKAGG PHYLTRFVTE KTRTNNITAI GGNATLLSLG DGEE
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