| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal_3179 |
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| Symbol | |
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| ID | 4843079 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS155 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009052 |
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| Strand | - |
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| Start bp | 3721212 |
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| End bp | 3723518 |
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| Gene Length | 2307 bp |
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| Protein Length | 768 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640120438 |
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| Product | diguanylate cyclase/phosphodiesterase |
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| Protein accession | YP_001051529 |
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| Protein GI | 126175380 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2200] FOG: EAL domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTAAATA GTTTTCGCGC ACGGCTGATT TTAGTTTTCT TTATTGTGCT GACTCTAGTG
CAGTTTGCCA CGGCATTTTC CGTATTGACG GCGACCGAAA GGGACAACTT TTTACAACAA
CAAAAAAGTT TAGATATTGG TGCCAATGTG TTTCTCGAAG TCCTTTCGAA TCGCGGTATT
CAGCTCAGCC AAAGTTTGTC CGTGCTCAGT GCCGATTTTG GTTTTAAGCG CGCGATTGCC
ACCGGCGAGC AAGAAACCAT TGAGTCAGTG TTATCCAATC ACGGCTCTCG TATCGGCGCC
GACGCTGCTG TGTTGTTGTC TCCAAAAGGG GAGCTGTTGA CCTCGAGTCT ACCCGGACTC
ACTCAGGATG ACATTCAATC CTTATTCGAT ATGACCACCA GCAATAACAA TGCTTTAGCT
ATCCTTAATT TTGATCATGC CAGCTATCAG TTTATGTTGC AGCCCGTGAA GGCGCCGACC
TTGATTGCTT GGGTCGGAAT GGGGTTCCTA TTGGATGAGA AAGTCGCCCA ACAAGCTAAA
GCCATTACCG GTATCGATGT CAGCTTTGTC AATCAAGCCA CGGGGCGCAC CGAAATCGCG
TCAACCTTAT CCGATGATGA AAAACGCAGT GTGGTAGAGC AGGCGAGCCT ATTCCCCAGC
CTACTGAAAA TGCCCAGTGA GAACATTCCC GTGGATTATC TATCCATGGC GATCAAACTT
TATGATCATA ACGGCAGCCA ATTAGCCCTG TTGCATCAGT CAAACCTCAA ATGGCAGCAA
AGTTATCAGC ATCTACGCAA TAATATGTTG CTGATTTTTG CCTTGACCTT AGCGCTGGCG
ATTGTGATTG CGATTTGGTT GTCGGGCAGT TTGACTGAAC CCGTGCATCA ACTGGTGACC
TATGCCCGTA AAATTGGTCA AGGTAAGCAG CCTGGCAGTA TTCAAGGTGC GCCAGCAGAA
CTGCGGGTGT TGGCTAAAAG TTTGTCCTTG ATGCGCGACG ATATTGAAGC GCGGGAAAAG
GATTTAGTCT ATCAATCCCG CCACGACAGT TTGACGGGAT TGCTCAATCG TTTTGCGGCA
AAACAGCATT TAGCGGATCT TAAACATGAG CTAGCAGGCG CTATGGTATT GCTGGATATT
AAACATTTTC GCCATATCAA CGACATTATC GGTTTTGCTA ACGCCGATAC CTTATTGGTG
CTTTTTGCCC GCCGTTTAGA GCAATTAGCC CCCACTCCAG ATTTACTCGC GCGATTAGAC
GGCGACTCAT TTTTACTCCT GTATAGCCAA GGTATTCGTC CCGAGCACTT GCTGAAATCA
TTGGATATGT TGGAGTCGCC ATTTCCAATC CAAGGCTCAA ATATTTCTCT TACCGTGCGG
GCGGGATTAC TGGAAATCGA TGGCAATGGT GCCGATATCG ATGTGTTAGT GCGCCGCGCC
GAAATCGCCC TCAATCAAGC CTGTCTCGAA GAACAACGCA TCGTCAGTTA TCGTCAGGGC
GCCGATGAGA AATACCAGCG TGAGCTGACG ATTATCCGCG ATTTGCCCAT AGGCTTGGCG
CAAAACCAAC TCTATCTCGT GTTTCAACCT AAGGTGGATT TACACTTAAA TCAGTGTACT
GGCGCCGAGG CACTGATCCG CTGGCAGCAT CCAACCTTAG GGTTTATTCC GCCCGATGAG
TTTATCCAAC TCGCTGAAAA CTCAGGTAAC ATTGATATCG TCAGCCAATG GGTGTTGCAG
CAGGCGATTC AACAATTAGT CGCATGGCAG CAGCGGGGGA TGGCGCTGAA ACTGGCCATT
AACCTGTCGG CCCATGATTT AGTCGATACC CGCTTGCCGA ATCAAATTGC CAGTTTATTA
AAAGACAATA ATCTGCCAAG TGGCGCACTC TGCATCGAAG TCACCGAAGG CGCTGTGATG
AAAGATGCAC AGACAGTGGT GAGTGTGTTG CAGCGATTCC GTGACATGGG CGTGTCGGTC
GCCATCGATG ACTTTGGCAC AGGGCATTCA TCCTTAGCAT ATTTGAAAAT TTTGCCGGTC
AATGAAGTGA AGATTGATCG TAGTTTTATC AAAGACATGC TCACGAATAG CCAAGATGTG
ATGATAGTGA ACACAAGCAT TCAGTTGATC CACGGCCTAG GTTTTACCGT TGTGGCCGAA
GGGGTTGAGG AACCAGAAGG TGTTGACATC CTGCGTAACC TCAATTGCGA CATCATCCAA
GGTTACGTGT TTTCAAAACC CTTAAAAGCG GCTGAATTTG ATCTGTGGTT TGAAGCGTTT
AACCATAAAA ATTCCTCTGA CGCATAA
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| Protein sequence | MLNSFRARLI LVFFIVLTLV QFATAFSVLT ATERDNFLQQ QKSLDIGANV FLEVLSNRGI
QLSQSLSVLS ADFGFKRAIA TGEQETIESV LSNHGSRIGA DAAVLLSPKG ELLTSSLPGL
TQDDIQSLFD MTTSNNNALA ILNFDHASYQ FMLQPVKAPT LIAWVGMGFL LDEKVAQQAK
AITGIDVSFV NQATGRTEIA STLSDDEKRS VVEQASLFPS LLKMPSENIP VDYLSMAIKL
YDHNGSQLAL LHQSNLKWQQ SYQHLRNNML LIFALTLALA IVIAIWLSGS LTEPVHQLVT
YARKIGQGKQ PGSIQGAPAE LRVLAKSLSL MRDDIEAREK DLVYQSRHDS LTGLLNRFAA
KQHLADLKHE LAGAMVLLDI KHFRHINDII GFANADTLLV LFARRLEQLA PTPDLLARLD
GDSFLLLYSQ GIRPEHLLKS LDMLESPFPI QGSNISLTVR AGLLEIDGNG ADIDVLVRRA
EIALNQACLE EQRIVSYRQG ADEKYQRELT IIRDLPIGLA QNQLYLVFQP KVDLHLNQCT
GAEALIRWQH PTLGFIPPDE FIQLAENSGN IDIVSQWVLQ QAIQQLVAWQ QRGMALKLAI
NLSAHDLVDT RLPNQIASLL KDNNLPSGAL CIEVTEGAVM KDAQTVVSVL QRFRDMGVSV
AIDDFGTGHS SLAYLKILPV NEVKIDRSFI KDMLTNSQDV MIVNTSIQLI HGLGFTVVAE
GVEEPEGVDI LRNLNCDIIQ GYVFSKPLKA AEFDLWFEAF NHKNSSDA
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