Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal_3115 |
Symbol | alaS |
ID | 4841952 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS155 |
Kingdom | Bacteria |
Replicon accession | NC_009052 |
Strand | - |
Start bp | 3646996 |
End bp | 3649620 |
Gene Length | 2625 bp |
Protein Length | 874 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640120374 |
Product | alanyl-tRNA synthetase |
Protein accession | YP_001051465 |
Protein GI | 126175316 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0013] Alanyl-tRNA synthetase |
TIGRFAM ID | [TIGR00344] alanine--tRNA ligase |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0471495 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTATCAAA CTACAGCAGA GCTTAGAAGC GCTTTCCTCG AATTTTTCCG CAGCAATGGT CATCAAGTTG TGGACAGTAG TTCATTAGTG CCAGGCAACG ATCCCACACT TTTATTTACC AATGCAGGCA TGAACCAGTT CAAGGACGTG TTTCTTGGCA TGGACAAACG CAATTATACG CGTGCGACCA CTGCTCAACG TTGTGTACGC GCCGGTGGTA AGCATAACGA TTTAGATAAC GTCGGTTATA CAGCACGTCA TCACACCTTT TTCGAAATGC TGGGTAACTT CAGTTTTGGT GATTATTTCA AAGAAGAAGC GATTCGCTTT GGCTGGACTT TCTTAACTGA AACTTTAAAG CTGCCGAAAG AACGTCTGTG TGTCACTATT TATCAAACAG ATGATGAAGC CTTTGAAATC TGGAATAAAA AGATTGGTGT TGCTGCCGAG AACATTATCC GTATCGGCGA CAACAAAGGT GCTGCTTATG CGTCAGATAA CTTCTGGCAA ATGGGTGATA CCGGTCCTTG CGGCCCATGT TCTGAGATTT TCTATGACCA TGGCGATCAC ATTTGGGGCG GCCGTCCTGG CAGTCCTGAA GAAGATGGCG ACCGTTTCAT CGAAATCTGG AACATAGTGT TCATGCAGTA CAACCGTCAA GCATCGGGTG AAATGTTGCC TTTGCCTAAG CCATCGGTTG ATACCGGCAT GGGGATTGAG CGTATTGCCG CGATTATGCA AGGCGTACAT TCTAACTACG AAATCGACAT ATTCCGTACG TTGATCGCTA AAGCGGCAGA AATCATCGGC GTAAGCGATT TAACCGAGAA GTCACTGCGC GTCATTGCCG ACCATATCCG TTCATGTGCA TTCCTTATTG CCGATGGTGT TATGCCGTCG AACGAAGGCC GCGGTTATGT GCTGCGCCGC ATTATTCGTC GCGCCGTTCG CCATGGTAAC AAGTTAGGCG CGACCGAAGC TTTCTTCTAT AAGCTGGTTC CGTCTTTGAT TGCGGTGATG GGCGATGCGG CCAAAGGGTT AGCTGAGACT CAAGCGATTG TTGAAAAAGC ACTGAAAGCG GAAGAAGAGC AATTTGCCCG GACGCTTGAA CGTGGTTTAG GCATTTTAGA TACGGCCTTA AACGAGTTAA AAGGTACTAC CTTAGACGGT GAAACGGTAT TTAAGCTGTA TGACACCTAT GGCTTCCCAA TGGATTTAAC TGCTGACGTG TGTCGTGAGC GCAACATTAT TGTCGATGAA GCAGGTTTCG AAGTCGCCAT GGCTGAACAA CGTAGCCGCG CACAAGCTGC CGGTAACTTT GGTGCAGATT ATAACGCGGC GCTGAAAATT GATGCCGAAA CCGCATTCAG TGGTTACACC GAATTAGCGG GCCAAGCTAA GATCACTGCG ATTTATCAAA ACGGTGAGTC AGTGACGGCG ATCAAAGCGG GTGACGAAGC GGTTGTTGTA CTCGACGTGA CACCTTTCTA CGCGGAATCT GGCGGTCAAG TGGGCGATAA AGGCCAACTG GTTGCGAGCG GTGTTGAGTT TACGGTTAAC GACACACAAA AGTACGGTCA AGCAACGGGC CATCAAGGTG TTTTAGCTAC AGGTAACTTG AGTGTTGGCC AAGTTGTTGA AGCAAAAGTC GACAAAAAAC TGCGTCACCG TACTCAGTTA AACCATTCTG TTACGCATTT ACTGCATGCC GCACTGCGTC AAGTGCTCGG TACTCACGTT TCGCAAAAAG GTTCTTTGGT TGATCCTGAG CGTTTGCGTT TTGACTTCTC CCATTTCGAA GGTGTAAAAG CCGCGGAATT AAAAGAAGTT GAAGAATTAG TTAACACTCA AATTCGTCGT AACCATGAGC TGAAAACCGC TGAAATGGGT ATAGACGAAG CCAAAGAGAA AGGCGCAATG GCGCTCTTTG GTGAGAAATA TGACTCACAA GTGCGTGTTG TGACTATGGG CGATTTCTCT ATCGAATTGT GTGGTGGTAC CCATGTGGGC CGCACGGGCG ATATTGGCTT ATTCAAAATC ACCTCTGAAG CGGGTATTGC TGCGGGTGTT CGTCGTATCG AAGCCGTTAC TGGCGCTGCG GCTATGGCCT ATGTGGCGCA GCAACAAGCT GAACTGGAAG AAGCTGCAGC CTTATTGAAA GGCGATGCCA ACTCAGTTGT CGCTAAGTTA AAAGCCCAGC TCGATAAGAT GAAGCAACTC GAAAAAGAAA TGGCGCAGTT GAAAGATAAA CTCGCGGCTG CAGCCAGTGC TGATTTAGTG GGCGATGCCG TTGTGGTTAA TGGCGTTAAC GTACTGATCA AAAAGTTAGA CGGCGTTGAG GCAAGCTCAT TACGCGGTCT ACAAGATGAA TTAAAACAAA AATTGAAATC GGCCATTATC GTTCTTGGCA CCGCGCAGGA AGGGAAAGTT AACCTGATCG CTGGTGTGAG TAACGATCTG ATCGGCAAAG TCAAAGCGGG TGAGCTAGTC GCTATGGTCG CTGCGCAAGT GGGCGGTAAA GGCGGCGGTC GTCCTGATAT GGCTCAAGCG GGCGGTAGCC AGCCAGAAAA TCTGGATGCG GCATTGGCTC AAGTATTACC TTGGATTACT GAGCGTCTAG CTTAA
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Protein sequence | MYQTTAELRS AFLEFFRSNG HQVVDSSSLV PGNDPTLLFT NAGMNQFKDV FLGMDKRNYT RATTAQRCVR AGGKHNDLDN VGYTARHHTF FEMLGNFSFG DYFKEEAIRF GWTFLTETLK LPKERLCVTI YQTDDEAFEI WNKKIGVAAE NIIRIGDNKG AAYASDNFWQ MGDTGPCGPC SEIFYDHGDH IWGGRPGSPE EDGDRFIEIW NIVFMQYNRQ ASGEMLPLPK PSVDTGMGIE RIAAIMQGVH SNYEIDIFRT LIAKAAEIIG VSDLTEKSLR VIADHIRSCA FLIADGVMPS NEGRGYVLRR IIRRAVRHGN KLGATEAFFY KLVPSLIAVM GDAAKGLAET QAIVEKALKA EEEQFARTLE RGLGILDTAL NELKGTTLDG ETVFKLYDTY GFPMDLTADV CRERNIIVDE AGFEVAMAEQ RSRAQAAGNF GADYNAALKI DAETAFSGYT ELAGQAKITA IYQNGESVTA IKAGDEAVVV LDVTPFYAES GGQVGDKGQL VASGVEFTVN DTQKYGQATG HQGVLATGNL SVGQVVEAKV DKKLRHRTQL NHSVTHLLHA ALRQVLGTHV SQKGSLVDPE RLRFDFSHFE GVKAAELKEV EELVNTQIRR NHELKTAEMG IDEAKEKGAM ALFGEKYDSQ VRVVTMGDFS IELCGGTHVG RTGDIGLFKI TSEAGIAAGV RRIEAVTGAA AMAYVAQQQA ELEEAAALLK GDANSVVAKL KAQLDKMKQL EKEMAQLKDK LAAAASADLV GDAVVVNGVN VLIKKLDGVE ASSLRGLQDE LKQKLKSAII VLGTAQEGKV NLIAGVSNDL IGKVKAGELV AMVAAQVGGK GGGRPDMAQA GGSQPENLDA ALAQVLPWIT ERLA
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