Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal_3054 |
Symbol | |
ID | 4845090 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS155 |
Kingdom | Bacteria |
Replicon accession | NC_009052 |
Strand | - |
Start bp | 3575430 |
End bp | 3576947 |
Gene Length | 1518 bp |
Protein Length | 505 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640120306 |
Product | deoxyribodipyrimidine photo-lyase |
Protein accession | YP_001051405 |
Protein GI | 126175256 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0415] Deoxyribodipyrimidine photolyase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.746759 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACATCAG TTAACGATTC AATGGCAATA GATTCAATGC CAATAGATTC AATGTCAATA AAAGTGCAGG GCAATAATGC ATTGATGTGG TTTCGCCAAG ATTTACGCCT TGCCGATAAT CAGGCATTAA CCGCTGCTTG CGATTGGGCG CGGGCGAATG GCGTGGCACT TAAGGCGATT TATATCGCTA CGCCAACCCA ATGGCAACGC CATGATGTGG CGCCCATTCA GTTGGATTTT ATCGAACGTC ACATCAATCT GCTTGCCCAA GGGCTGGCGA GTTTGGGTAT TACATTCGAA TTAATTCAGT TAGATGCCTT TGCCGATGTG CCAGCGTTTA TCGGTCATTA TTGTCAGCAG CAGGGTATTA GCCGCGTGTT TGCCGGTAGT GAGCCTGAGA TTAACGAGCA ACAGCGTGAC CAAGCCTGTA TTCAGGCGGG TATTCCTCTG GTGCTAACCG ATGAGCATTG TTTGCTTAAG CCGGGCACAG TGCTGAATTT GTCCGGCGAC ATGTATAAGG TGTTCACCCC TTTTAGCCGT AAGTGGCGAG AAATTGCCGC CCGTCATGCC ATTTTTCTGC TTCCAGTTCC GGCGCCGCTT GGACCTGTGT TGACCGAGCC AAAGCCGCAT TTGTTTAACA ATGTCACTAA AGTATCGAGT GAACTTTGGG CTGCGGGAGA AGGGCAGGCA AAGCGTATAC TTTCAGCATT TATTCAGCAG AAAGTGCAGG ATTATAAGCA AGATAGGGAT TTCCCCGCCA TCGATGGCAC CAGTTCAATT TCACCTTATC TGGCCATTGG CGTCATTAGC CCAAGACAAT GCGTTGCCGC GTTGCTGCAT GACTTCCCCG AGGTGATTGT CGACGATACT AGTCCAGCCC GTACTTGGTT AAATGAGCTT ACCTGGCGTG AGTTTTATCG TCATTTGCTG GTGGCATTTC CTGATTTATC TAAGAATCAT AATTTCAATC GACAAGCCGA CCATGTGCAG TGGCGAAACA ATCCGCAGGA GTTTGCTGCT TGGTGTGAAG GTCGTACTGG CTATCCGATT GTCGATGCGG CTATGCGCCA ACTCAATCAA ACGGGTTGGA TGCACAACCG TTTGCGTATG GTGGTGGCGA GTTTCCTGAC TAAACATCTA CTGATTGATT GGCGTTGGGG CGAGCGTTAT TTCCGCCAAA AGCTCATCGA TGGTGACTTG GCTGCAAATA ATGGCGGCTG GCAGTGGTCC GCCGGTTGTG GCTGCGATGC CCAGCCTTAT TTCCGCATTT TTAATCCTAT GAGCCAGAGT GAAAAGTTTG ATCCAGATGG CAGCTTCATC CGTAAGTACT TACCAGAGCT CGCATCTTGG GGAATTAAGC AATTACATCA ACCCAGTACA GCGCAGACAC CGTCCTTGTT TGAACAGCCG TTATTTAACA TTAAAACGGC TTATCCGAGT GCGATTGTCG AGCATAGTGC AGCAAGAGCA AGGGCGTTAA CCGTACTAGG CGTATTGAAA AAGGCCGCGG CCCAATAA
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Protein sequence | MTSVNDSMAI DSMPIDSMSI KVQGNNALMW FRQDLRLADN QALTAACDWA RANGVALKAI YIATPTQWQR HDVAPIQLDF IERHINLLAQ GLASLGITFE LIQLDAFADV PAFIGHYCQQ QGISRVFAGS EPEINEQQRD QACIQAGIPL VLTDEHCLLK PGTVLNLSGD MYKVFTPFSR KWREIAARHA IFLLPVPAPL GPVLTEPKPH LFNNVTKVSS ELWAAGEGQA KRILSAFIQQ KVQDYKQDRD FPAIDGTSSI SPYLAIGVIS PRQCVAALLH DFPEVIVDDT SPARTWLNEL TWREFYRHLL VAFPDLSKNH NFNRQADHVQ WRNNPQEFAA WCEGRTGYPI VDAAMRQLNQ TGWMHNRLRM VVASFLTKHL LIDWRWGERY FRQKLIDGDL AANNGGWQWS AGCGCDAQPY FRIFNPMSQS EKFDPDGSFI RKYLPELASW GIKQLHQPST AQTPSLFEQP LFNIKTAYPS AIVEHSAARA RALTVLGVLK KAAAQ
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