Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal_3052 |
Symbol | |
ID | 4845088 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS155 |
Kingdom | Bacteria |
Replicon accession | NC_009052 |
Strand | - |
Start bp | 3574160 |
End bp | 3574960 |
Gene Length | 801 bp |
Protein Length | 266 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640120304 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_001051403 |
Protein GI | 126175254 |
COG category | [R] General function prediction only |
COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGACGTTG TTAAGCCATT GAAAATTAAT ACCGTGCTTA TTACAGGTGC AAGCTCAGGC ATTGGGCTGC AACTGGCGCA GGATTATTTA GCCTTAGGTT GGCACGTCAT TGCCTGTGGC CGCTCCCAAG AAAGATTAGA TGCGTTAGCC TTGAATGAAC TCGTAGGTGC CACGCTGTTA ATTTTTGATA TATCCCAGCG CGACCAAGTT CAACAAGCTG GCCAAGATTT AGCCGAGCTG TTGGCGAAAA CCGATTGTCA GCTCGATTTG GTGGTTTTGA ACGCAGGCAG TTGTGAGTAT ATAGACGATG CTAAGGCCTT CGATGATGTG TTATTCGAGC GCGTCGTCCA TACCAATTTA ATTGCGATGG GATATTGTCT CGGGGCATTT TTACCTTTAA TGCCAAGGGG TTCACGTATT GGCTTAATGA GTTCCAGCGC TATTTATTTA CCTTTCCCTC GCGCTGAAGC CTACGGCGCC TCTAAAGCTG GCGTGCAGTA TCTCGCCTCG AGTCTCTCGC TTGATCTTGC TAAGAATGAC ATAGGTGTGA GCTTGATTTG CCCTGGTTTC GTGGCGACGC CACTGACCGC AAAAAATGAT TTTTCTATGC CAATGCAAGT GAGTGTACAA ACCGCTTCTA AGGCGATACG TAATGGGCTG AAAGGTGGCA AGCGCGAGAT CCATTTTCCG CGACGCTTTA CTTATCTATT GAAATTGATG TCGTTTTTAC CTGCCTTTGT GTGGCAAAAA ATGATTGCAA ACGATACTCA AGCCAAGCCG CTTAAGGACA AGAGTTTATG A
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Protein sequence | MDVVKPLKIN TVLITGASSG IGLQLAQDYL ALGWHVIACG RSQERLDALA LNELVGATLL IFDISQRDQV QQAGQDLAEL LAKTDCQLDL VVLNAGSCEY IDDAKAFDDV LFERVVHTNL IAMGYCLGAF LPLMPRGSRI GLMSSSAIYL PFPRAEAYGA SKAGVQYLAS SLSLDLAKND IGVSLICPGF VATPLTAKND FSMPMQVSVQ TASKAIRNGL KGGKREIHFP RRFTYLLKLM SFLPAFVWQK MIANDTQAKP LKDKSL
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