| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal_2985 |
|---|
| Symbol | xseA |
|---|
| ID | 4843272 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS155 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009052 |
|---|
| Strand | + |
|---|
| Start bp | 3510964 |
|---|
| End bp | 3512310 |
|---|
| Gene Length | 1347 bp |
|---|
| Protein Length | 448 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 640120233 |
|---|
| Product | exodeoxyribonuclease VII large subunit |
|---|
| Protein accession | YP_001051336 |
|---|
| Protein GI | 126175187 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG1570] Exonuclease VII, large subunit |
|---|
| TIGRFAM ID | [TIGR00237] exodeoxyribonuclease VII, large subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.274759 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAAGGCA CCAAAAACAA TATTTATACT GTCTCGCGGC TCAATGGTGA AGTCAGACAA
ATTCTCGAGG GACAACTGGG TAAAATTTGG CTCAATGGCG AAATATCCAA CTTTTCCTCC
CCCAGCTCAG GTCATTGGTA TCTCACCTTA AAAGACCACT CTTCCCAGAT CCGTTGCGCC
ATGTTTAAAG GCCGTAATCA AACGGTCAGC TTTAAGCCCA TCAATGGTCA GCAAGTGTTA
GTCAAAGGCG CGATCAGCGT GTATGAACCC AGAGGCGACT ATCAATTATT AATTGAGTCC
ATGCTGCCTG CAGGGGATGG ATTACTCGCC CAGCAGTTCG ATGCACTCAA AATGAAACTC
GCCGCCGAAG GATTATTCGC CGCGGACACC AAAAGACCAT TGCCGAAAAA TATCCAACGT
ATTGGCGTAA TCACTTCGCC AACCGGCGCG GCAATTCGCG ACGTCTTACA CGTACTCGCA
AGGCGCGACC CTTCAATCGA AGTCATTATC TATCCGACTC AGGTTCAAGG CGAAACTGCA
GCGCAGAGTA TTTGTCAGGC AATCAATATC GCCAACCAGC GTTTAGAGGT CGACGTATTA
CTGCTTACCC GCGGCGGCGG TTCGCTTGAG GATTTGTGGT GTTTTAACAG CGAAGCCCTC
GCCCACACAA TTTATAACAG CGCCCTGCCC GTGGTCAGCG CCGTCGGCCA CGAAGTCGAC
ACCACCATCA GTGATTACGT GGCTGATATT CGCGCCCCAA CACCATCTGC AGGTGCCGAG
TTGTTATCCC AAGATAGCGA CAATAAGGCG CAAAAACTCG CAACAGCCTT ATCGCGCTTG
CAACAAAGTG CGAAACATTA TCAACTTAAG CAAGAAAGAC GACTCAGTTT GCTTGAGCAC
AGACTGCAGC GCCAAGATCC CAAACGGACC CTGCAACAGT TCGAGCAAAG ATTCGATGAG
ATGCAATTAA GACTGGAGTC GGCGCTGTTG AATCGCTTGC ACATACTCAG CCGCCGTCAG
CAGTTACTCG CAAGTCGCCT TGAACAGCAA TCTCCCAAGC ATAAGCTCAC CATTGAGGGT
AACCGCCTAA GTTATCTTGC GAGTCGCTTA CAGGATGCAT TACAGGACAA ACTGAGCCAA
AGTGAGCAAC GGATAAAATA CGCGGCCCAT CAACTCGAAA CCGTCAGTCC GCTTGCTACC
TTGAGCCGTG GTTACAGCAT CACCACTGAC ATCCACAATC AAGTGGTCGA CTCTGCCGAT
AAACTGACAA TCGGTGATAG CCTGCAAACC CGCTTACGCC ATGGGCAAGT GATATCAACC
GTCACTCAGA TCAAGCCGCT CGAATAA
|
|---|
| Protein sequence | MQGTKNNIYT VSRLNGEVRQ ILEGQLGKIW LNGEISNFSS PSSGHWYLTL KDHSSQIRCA
MFKGRNQTVS FKPINGQQVL VKGAISVYEP RGDYQLLIES MLPAGDGLLA QQFDALKMKL
AAEGLFAADT KRPLPKNIQR IGVITSPTGA AIRDVLHVLA RRDPSIEVII YPTQVQGETA
AQSICQAINI ANQRLEVDVL LLTRGGGSLE DLWCFNSEAL AHTIYNSALP VVSAVGHEVD
TTISDYVADI RAPTPSAGAE LLSQDSDNKA QKLATALSRL QQSAKHYQLK QERRLSLLEH
RLQRQDPKRT LQQFEQRFDE MQLRLESALL NRLHILSRRQ QLLASRLEQQ SPKHKLTIEG
NRLSYLASRL QDALQDKLSQ SEQRIKYAAH QLETVSPLAT LSRGYSITTD IHNQVVDSAD
KLTIGDSLQT RLRHGQVIST VTQIKPLE
|
|---|
| |