| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal_2914 |
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| Symbol | fliR |
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| ID | 4842143 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS155 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009052 |
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| Strand | - |
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| Start bp | 3429720 |
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| End bp | 3430517 |
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| Gene Length | 798 bp |
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| Protein Length | 265 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640120161 |
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| Product | flagellar biosynthesis protein FliR |
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| Protein accession | YP_001051265 |
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| Protein GI | 126175116 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1684] Flagellar biosynthesis pathway, component FliR |
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| TIGRFAM ID | [TIGR01400] flagellar biosynthetic protein FliR |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.401935 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGAGCTGC TGCTCGATAC CTTAATGCAG ACCATTGCCG CTTATATGTG GCCGCTGTTT
CGGGTCGCGA GTATGTTGAT GGTTATGGTG GTATTTGGGG CGGCAACTAC CCCAAGCCGC
GTACGCTTAT TATTGGCTAT GGCGATTACC TTTGCGATAG CGCCAGTCCT TCCTCCCGTT
CAAAATGCCG ATTTATTTTC ACTCAGCGCA GTATTTATCA CCGCGCAGCA AATTATTATT
GGTGTTGCCA TGGGGTTTGT GACTCAAATG GTGATGCAAG TTTTTGTATT AACTGGGCAG
ATTATTGGTA TGCAAACCAG CCTCGGTTTT GCCTCTATGG TTGATCCAGG TTCAGGTCAG
CAAACGCCGG TTATTGGTAA CTTTTTTCTA TTATTGGCGA CATTGATCTT CTTAGCCGTA
GATGGCCATC TGTTGATGAT CCGTATGTTG GTGGCGAGCT TTGAGACCCT ACCCATTTCT
AATCAAGGAT TAACACTCAC TAGCTACCGT GCTTTAGCAG ATTGGGGCTC GTATATGTTT
GGTGCTGCAT TAACTATGTC GATATCCGCG ATTATCGCCT TGTTGTTAGT CAATTTGTCC
TTCGGGGTGA TGACCCGCGC CGCGCCGCAG TTAAACATTT TCTCTATTGG TTTTCCGATC
ACTATGATTG GCGGGCTGTT TATTCTTTGG TTAACCTTAA CACCAGTCAT GGAGCATTTT
GATGAAGTAT GGGCCGCGGC TCAAGTGCTG CTTTGCGATA TGTTAGCGCT TCAATGTAAC
GCAGATGGCT TGATATGA
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| Protein sequence | MELLLDTLMQ TIAAYMWPLF RVASMLMVMV VFGAATTPSR VRLLLAMAIT FAIAPVLPPV
QNADLFSLSA VFITAQQIII GVAMGFVTQM VMQVFVLTGQ IIGMQTSLGF ASMVDPGSGQ
QTPVIGNFFL LLATLIFLAV DGHLLMIRML VASFETLPIS NQGLTLTSYR ALADWGSYMF
GAALTMSISA IIALLLVNLS FGVMTRAAPQ LNIFSIGFPI TMIGGLFILW LTLTPVMEHF
DEVWAAAQVL LCDMLALQCN ADGLI
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