| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal_2743 |
|---|
| Symbol | |
|---|
| ID | 4845279 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS155 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009052 |
|---|
| Strand | - |
|---|
| Start bp | 3217934 |
|---|
| End bp | 3221377 |
|---|
| Gene Length | 3444 bp |
|---|
| Protein Length | 1147 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 640119979 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001051099 |
|---|
| Protein GI | 126174950 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG5271] AAA ATPase containing von Willebrand factor type A (vWA) domain |
|---|
| TIGRFAM ID | [TIGR03504] FimV C-terminal domain
[TIGR03505] FimV N-terminal domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.0000711361 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAATTTC GCACTTCGTA TCTTGTGGGT CTAATGGCCA CTGTTTTAGC TGTTTCTTCT
ACCGCTTATT TTATTGATCC CGCCGTTGCA GCAGATACGC CAAGATTAAA ACCCTTAAAA
ATCATGGGGC CAGACGGACA GATCCGTCAA GTTAATCATC AATATGGCCC AACGACATCC
AGAGACACGT TTTGGAGCAT AGCGCAAAAA GTCCGTCCCG ATGCCAGCGT CAGCGTCTAT
CAAGTGATGG CCGCGCTATA CGATGCTAAC CCTCATGCGT TTAACTCTGC CAGCTACAAC
AGTTTAGAAC GTGGCATGAT CCTGCTGATC CCGTCTAAAG AAGTCATGCT GTCGATTCCC
AATAGTATGG CGATAGCAAG AGCAGAGCAA AGCGACAGAC AATCCCGTGC GCCAGCGAAA
GCGACGCAGA AACCTGCTGC TAAAGTCACC ACGCAAGCCC CTGTTACTGC TCCTGTTGTG
ATTGCTGAAA CCAAAGTTAT CACTGAAACC AAAGTGACGC CGCCCAAAGT GCCAGTGGTA
GAAACGCCGG CGCCAGACAA GCCTAAGATG CTGAGCTCTG ATGTAACGTC GCGCTTAGAA
GCGGCCGAAA GTAAAAATCT GTCATTAACC GATGAATTAG CTCGCACCCA AGATCAACTC
ACTGTCCGCA CTTCAGATGT TGAAGCGCTA AAAGTGAAAG TTGAAGAATT GAATCAACGC
ATTGCCGTGC TAGAAGAAAC CCTGCAAGCC AGCAAACTGC AAAATCAAGC TTTGAAAGCC
GAAGTTGAAG CTGCCCAAAC GCCAGAGATG GCAACGGGAA CGGCTGAAGC TGAGACTCAG
GCGCCGGCTG AGCCCGATGA TTTATGGCGT AATATCCTTA ATAGTCCAGT GTTAATGATT
GCTGCCGCTG TGATCCCGGC CTTGTTCTTG TTACTGGCGG TGTTCTGGTT GCTGCGCCGT
AAGCGTAATA AAGAACGTCG TGAAATGCAG GCGCAAGAAG CGGTGATGGC CGCGGGTGCT
GCTGGCGTTG CCGGTACTGC CATCATGGAC ATGGATGATG ACGACTTAGA TGATATGGCG
GTGCATTTAG ATACCGACCA TGCGGATTCT ATCGATAGTC TGCTTGATAT GGGCAGCGTC
GATTTACAAC CTGAACAAGA TTTGACTGAC TCAAACGATC AGATGGATAT GGCGTCTGAA
ATGTTTGTCG ATCCGGGTCT CTCTGCCGAA CCTGAGGTTG AAGACGAAGG GCAATCTCTT
GATGACCTGT GGGCCGAAGC CATGGGCGAT CAGGAAGAGG ATATTGTTGA GGAAAAACCT
AAATCTGACA ATATTCTTGA GGAAGCCGAT CTCGATGCGC TATTAGCGGG CCTAGGTTCA
GAAGACAGCA CTGATGCTGA AGACGATTTA AGTGAATTAG AGCGAAACTT TGCTAGCGAT
TTAGCTGAAG AAGACGACGT TGAAGTAGAA GATACTCAAC CTGCCAATGA AGCCGTCGCC
GATGACGATG ATCTCGATGC CTTACTTGCC GAGTTTAGTG TTCCTGCTGA AGATCCAGAA
ACGGCAAAAG AACCTGCAAC AGAATCTATG GAGTCTAACG ATGAAGATCT CAGTGCCGCC
ATCGCCGCAG AACTCGATGA TGAGCTAGAT GATGAACTGG GCGGAGAAGA GGTTGATGAT
ATCGATGCCC TATTGGCCGA TTTCGATAAA CCAACGCCAA CCGCAGAACC TGAAGTCGAA
TCTGATCTTG GCGCTGAAAT TGCCGCCGAG TTAGATGCCG AACTTGATGA GCTGGGCGTA
GAAGATACCG ATGACATCGA TGCCTTGTTA GCAGATTTTG ATAAACCAGC AGAACCTGAA
GTCGAGCCTG ATCTTGGCGC TGAAATTGCC GCCGAGTTAG ACGCAGAGCT GGATGAACTG
GGCGTAGAAG ACACTGATGA TATCGATGCG CTGTTAGCAG ACTTTGATAA ACCAGTAGAA
CCCGAAGCAG AGCCTGATCT TGGCGCTGAA ATTGCCGCCG AGTTAGATGC AGAGCTGGAT
GAACTAGGCG TTGAAGACAC TGACGATATC GATGCGCTGT TAGCTGATTT CGATAAACCA
GCAGAACCCG AAGTTGAACC CGATCTTGGT GCTGAAATCG CCGCCGAGTT AGACGATGAA
CTGGATGAAT TAGGCGTAGA TGAATCCGAT GATATTGATT CGTTGCTGGC GAGTTTTGAT
GCTGAGCCTG AAATCAAAGT TGATGCTGAA GACAATGCCG AAAACGATAC CGAAGATGAT
GCGATCAGTG CAGAAATTGC CGCAGAGCTA GAAGCTTCGT TACCGGAAGA TATCAAGGGC
GAAGCGTCAG GCGATGAAGA TTTAGATGCG CTGTTAGCTG AATTTGATGT GCCAGAGCAA
CTCGATGCCG ATGAAGATGA ATTCGACTTC GATATGGAAA CGGCGCAGCT TGATGCGGAC
GATAACGCCA CAGATGAAGA CAATTTACTC AAAGGTATTG GTGCGTCTCA CTCGATTGAC
GGCACTGATG ATACTTTCTC GTTAGTCGAA GAGTTGGGTG AAGATGATGA TTCTGACGCC
CTGACTGCGG CAGCAGCCAC TTTAGCTGCC GCTACCGCCG CAGCGAGTGT TAAGGAAAAA
GAGTCTTCTT TCTTTAATGA TTTAAAAGCC AATAAGAGCA AAGATCCCCA CGTGCTCGAT
TGGGACTCAG AGCTTGATTT TGCGCCTAAG GCCAAACCTG CTGCGACGCC AACCAATGCC
GCCGCTGAAA CGGATGTCGA TAGTGTCGAG CCTAATGCTG ATGCTTCGCT AGCTGATACG
CCGGCTCCGG ATGATGCGAC TCAAGAGAAG CCGATTAAGG CGACGCGTAA CGATGTTGAT
TTTAGTGAAG ATTTTAAACT CGATACCCAA GAGGATGCTG ACGATTCTGA GCAAGTCCTC
GATTTAAGCG ACGATAATGT ACTTGCTGCT TTCACGGCCA ATACCGATTT TGATGACGAT
GAAGATGTAC TGACGTCGGA AGACAGTTTC TCACTCGTCG ATGATCTCAC AGTCGACGAA
GCGTTAGCAG CACTCGATGC CCAAGAATCG CGTAAAGCGC AGAAGAAGTT TGTTCCTGAG
CATGATTTAA CGAATTTCCA AAATGAAAAC GGCTTTATCG ACATCGACAA GTTGTTGAAT
GATGCCGATG AAGACGGCAC TGATACCGAT TTGTATTCGG AAGTCGACGT GGAAATGAGT
GATGTCGGAG CCTTAATCGG TGACGCCGCG ATGATTGATG TCGATGATGA AGAAAACTCA
GTCAACGCTA AGCTGGATTT AGCTCGCGCT TATATCGAAA TTGACGACAG CGACAGCGCC
AAAGCCCTGC TCAAAGAAGT GCAAATTGAT GGTAACGAGC GCCAGCAAGA TGAAGCTGGA
CGTTTACTCA AAGAGATGAG TTAA
|
|---|
| Protein sequence | MKFRTSYLVG LMATVLAVSS TAYFIDPAVA ADTPRLKPLK IMGPDGQIRQ VNHQYGPTTS
RDTFWSIAQK VRPDASVSVY QVMAALYDAN PHAFNSASYN SLERGMILLI PSKEVMLSIP
NSMAIARAEQ SDRQSRAPAK ATQKPAAKVT TQAPVTAPVV IAETKVITET KVTPPKVPVV
ETPAPDKPKM LSSDVTSRLE AAESKNLSLT DELARTQDQL TVRTSDVEAL KVKVEELNQR
IAVLEETLQA SKLQNQALKA EVEAAQTPEM ATGTAEAETQ APAEPDDLWR NILNSPVLMI
AAAVIPALFL LLAVFWLLRR KRNKERREMQ AQEAVMAAGA AGVAGTAIMD MDDDDLDDMA
VHLDTDHADS IDSLLDMGSV DLQPEQDLTD SNDQMDMASE MFVDPGLSAE PEVEDEGQSL
DDLWAEAMGD QEEDIVEEKP KSDNILEEAD LDALLAGLGS EDSTDAEDDL SELERNFASD
LAEEDDVEVE DTQPANEAVA DDDDLDALLA EFSVPAEDPE TAKEPATESM ESNDEDLSAA
IAAELDDELD DELGGEEVDD IDALLADFDK PTPTAEPEVE SDLGAEIAAE LDAELDELGV
EDTDDIDALL ADFDKPAEPE VEPDLGAEIA AELDAELDEL GVEDTDDIDA LLADFDKPVE
PEAEPDLGAE IAAELDAELD ELGVEDTDDI DALLADFDKP AEPEVEPDLG AEIAAELDDE
LDELGVDESD DIDSLLASFD AEPEIKVDAE DNAENDTEDD AISAEIAAEL EASLPEDIKG
EASGDEDLDA LLAEFDVPEQ LDADEDEFDF DMETAQLDAD DNATDEDNLL KGIGASHSID
GTDDTFSLVE ELGEDDDSDA LTAAAATLAA ATAAASVKEK ESSFFNDLKA NKSKDPHVLD
WDSELDFAPK AKPAATPTNA AAETDVDSVE PNADASLADT PAPDDATQEK PIKATRNDVD
FSEDFKLDTQ EDADDSEQVL DLSDDNVLAA FTANTDFDDD EDVLTSEDSF SLVDDLTVDE
ALAALDAQES RKAQKKFVPE HDLTNFQNEN GFIDIDKLLN DADEDGTDTD LYSEVDVEMS
DVGALIGDAA MIDVDDEENS VNAKLDLARA YIEIDDSDSA KALLKEVQID GNERQQDEAG
RLLKEMS
|
|---|
| |