Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal_2570 |
Symbol | rlmL |
ID | 4843642 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS155 |
Kingdom | Bacteria |
Replicon accession | NC_009052 |
Strand | - |
Start bp | 3012941 |
End bp | 3015070 |
Gene Length | 2130 bp |
Protein Length | 709 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640119801 |
Product | 23S rRNA m(2)G2445 methyltransferase |
Protein accession | YP_001050932 |
Protein GI | 126174783 |
COG category | [L] Replication, recombination and repair [R] General function prediction only |
COG ID | [COG0116] Predicted N6-adenine-specific DNA methylase [COG1092] Predicted SAM-dependent methyltransferases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0113028 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTTAATT TTTTTGCCGC CGCCCCTAAG GGCTTTGAAT ATAGCTTAGC CCAAGAGCTG ACAGAATTTG GTGCGACTGA AGTAAAAGAG AGTGTTGCTG GTGTGTATTT CACGGCCTCC TTAACTTTAG CGTATCGCAT TACTTTATGG ACACGCTTAG CCAGCCGCAT TGTGTTGGTT ATCTATAAAG GAAGCTGCGA GTCGGCAGAA CAACTCTATA ATGCAGCTTA TTGTGTTGAT TGGCCGGCAC ACTTTTCCAA TAAAAGCACT TTTAGTATCG ATTTCCATGG TACGGGTGGT TTTCTTAATA ATACCCAGTT TGGCGCCTTG AAGATTAAGG ATGCGATTGT CGATCGTTTC CGCGACGATG ATATTGAGCG TCCGAATGTG TCTCGCGTTG ATGCTGAATT TAAAGTCGAT GCGCATTTCC GTAATGGCGT GATCACGATT GCGATGAACT TCTCGGGTCC ATCGCTTCAT CAACGTGGCT ATCGTTCGAC CACAGGTGAA GCGCCATTGA AGGAAAACTT AGCCGCCAAC ATGCTCGTAC GCAGTGGCTG GCAAGCGTCG CCTTCAACCT TGCTCGATCC TTTCTGTGGT AGCGGTACAG TGCTGATTGA AGCGGCGTTA ATGGCGGCTG ATATTGCCCC TGGTCTGCAA CGTAGTCGTT TTGGTTTTGA ACATTGGCGT CGCCATGATA AAGCCGTGTG GCAAGAAATC GTTGAAGAAG CGAAAGCGCG TGCTTCATTA GGCGTGAAAC GTTGCGAGAT TAAATTCTAC GGTTCTGATA TCGATTCGCG CTTAGTCGCG TTAGCGAAAC GTAACGCCGA AAATGCCGGT GTACTGGAGT TAATCGAGTT TAACGTTGCG GATGCTTTAA CGATAGCGCC GCCTGCGGAA AGCGGCTATT TGATCACCAA CCCACCTTAT GGTGAGCGTT TAGGCAATGT GTCTGAGTTA TTGCAGCTTT ACTATCAGCT GGGCGACAAG TTTAAGAAAG AGTTTGGCGG CTGGAAAGTG GCCATGCTGT GTAGTGATAT CGAACTGGTG TCATCGCTAA AGCTTAAAGC CGATAAACAA ATGAAGATGT TTAACGGCGC ACTTGAATGT GCTTTTAACA TCTACACCTT ACATGCCAAC AGTACTCGCC GTGATACGCC AGTGCTGCCA GATGGCGTCG ACATTGCTGA TATTGCCCCA GCTTTTGCTA ACCGCATTAA GAAGAATGCC AAGTTATTAG AGAAATGGGC GAAGAAAGAA GGCATCGACA GCTATCGTAT TTACGATGCC GATATTCCTG AATATAACGT CGCAGTAGAT AAGTATTTAG ATTACGTGAT TATTCAAGAG TATATGGCGC CAGCGACCAT ACCTGAAGCC GTGACTAAAC GTCGTTTAAG TGATGTGTTA TTAGCACTGC CATCGGCCAT TGGCATCAAT CCTAACAAGA TGATCATGAA GACGCGTGAG CGTCAAAAGG GCACGAGTCA ATATCAAAAG CTGGATGAGC GCAAGCTAGA ACTTATTACC ACTGAATATG GCGCTAAGTT CAAGTTGAAC TTAACCGGTT ATTTGGATAC AGGTTTATTC CTCGATCACA GATTGACACG TCGTTTAGTC GGTCAAAAAT CTAAAGGTCG CCGCGTACTG AACTTGTTCT CTTACACAGG TTCTGCTTCT GTGCATGCAG CGCTTGGCGG TGCTAAGTCG GTGACGACGG TCGATATGTC CAATACCTAT ATCGCTTGGG CGAAGGACAA CTTTGCGCTC AATGGCCTGC AAGGTAAGCA GTATGAGTTT GTTCAATCTG ACTGCATGCA GTGGATTAGG GATTGTAATG AACAGTACGA TCTGATTTTT ATCGATCCGC CGACCTTCTC AAACTCTAAG CGCATGGAAG ATTCGTTTGA TGTGCAACGG GATCATGTGA ATTTACTGTC ATCCTTAGTG AAACTGCTCA GCCCAACGGG CGAGCTAGTG TTCTCTAACA ATAAACGTAA GTTTAAGATG GACATAGAGA CGCTGACAAA GATGAACATT AATGTGACAA ACATTGATGA CGTGACTTTA CCTATGGACT ACAAACGTAA TCCACATATC CATAACACCT GGCTTATCAC CCATGCCTGA
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Protein sequence | MLNFFAAAPK GFEYSLAQEL TEFGATEVKE SVAGVYFTAS LTLAYRITLW TRLASRIVLV IYKGSCESAE QLYNAAYCVD WPAHFSNKST FSIDFHGTGG FLNNTQFGAL KIKDAIVDRF RDDDIERPNV SRVDAEFKVD AHFRNGVITI AMNFSGPSLH QRGYRSTTGE APLKENLAAN MLVRSGWQAS PSTLLDPFCG SGTVLIEAAL MAADIAPGLQ RSRFGFEHWR RHDKAVWQEI VEEAKARASL GVKRCEIKFY GSDIDSRLVA LAKRNAENAG VLELIEFNVA DALTIAPPAE SGYLITNPPY GERLGNVSEL LQLYYQLGDK FKKEFGGWKV AMLCSDIELV SSLKLKADKQ MKMFNGALEC AFNIYTLHAN STRRDTPVLP DGVDIADIAP AFANRIKKNA KLLEKWAKKE GIDSYRIYDA DIPEYNVAVD KYLDYVIIQE YMAPATIPEA VTKRRLSDVL LALPSAIGIN PNKMIMKTRE RQKGTSQYQK LDERKLELIT TEYGAKFKLN LTGYLDTGLF LDHRLTRRLV GQKSKGRRVL NLFSYTGSAS VHAALGGAKS VTTVDMSNTY IAWAKDNFAL NGLQGKQYEF VQSDCMQWIR DCNEQYDLIF IDPPTFSNSK RMEDSFDVQR DHVNLLSSLV KLLSPTGELV FSNNKRKFKM DIETLTKMNI NVTNIDDVTL PMDYKRNPHI HNTWLITHA
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