Gene Sbal_2561 details

Gene Information

• Locus tag: Sbal_2561
• Symbol: uvrC
• ID: 4843633
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella baltica OS155
• Kingdom: Bacteria
• Replicon accession: NC_009052
• Strand: -
• Start bp: 2999137
• End bp: 3000966
• Gene Length: 1830 bp
• Protein Length: 609 aa
• Translation table: 11
• GC content: 47%
• IMG OID: 640119789
• Product: excinuclease ABC subunit C
• Protein accession: YP_001050923
• Protein GI: 126174774
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0322] Nuclease subunit of the excinuclease complex
• TIGRFAM ID: [TIGR00194] excinuclease ABC, C subunit

Plasmid Coverage information

• Num covering plasmid clones: 6
• Plasmid unclonability p-value: 0.00257936
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCGAATG AATTTAACGC CCAAAGTTTT TTACGTACGG TTTCATCCTC CGCTGGGGTT 
TATCGCATGT ATGACGTCAA GAATGACGTC ATTTATGTGG GTAAAGCCAA AGATCTCAAA 
AAACGGCTTA CCTCGTATTT TCGTAAAAAC CTCGCTAATG TTAAGACCCA AGCCTTAGTC 
TCGCATATTC ACCATATTAA TGTGACGCTG ACCCACAGCG AAACCGATGC TCTGTTGCTT 
GAGAATGATT ACATCAAGCA ATACATGCCA AAATACAATG TGTTATTGCG TGATGACAAA 
TCTTATCCTT ACATACTGTT AAGCCAGCAC GAACACCCAA GGCTTGCTTA TCATCGTGGT 
CCGCAGCGGG AAAAAGGCCA CTATTTTGGC CCTTATCCTA ACGGCGGCGC CGTGCGTGAA 
AGCCTGCATT TAATGCAGAA GCTGTTTCCA ATTCGTCAAT GTGACGACCT TTACTACAAG 
TCTCGCTCAC GCCCCTGTTT ACAATATCAA CTTTCCCGTT GTAGCGCGCC CTGTGTGGGT 
AAAGTCAGCA ACGCTGATTA CGACGAGCAA GTGAAACTCG CCAGCCTGTT TTTAAAGGGC 
AAAGATCAGC AAGTGATCAG CGCCTTGGTT GACAAAATGG AGCTTGCGGC TGAGCGACAA 
GCTTATGAGC AAGCTGCACG ATTTCGCGAT CAGATCATGG CGCTGCGTAA AGTCGCCGAA 
CAACAGGAAG TATCGAATAA TAAAGGCGAT ATGGATGTCA TCGGTGTGCA TTATTCGTCG 
GGCATCGCCT GTTTCCATTT GCTGTTTATC CGCGAGGGTA AAATTTTTGG TAGTCGCAGC 
TATTATCCTT CTGTGCCGGC CCAAACCGAT ATGGACGAAG TGCTGCGCTC TTTCATCCTG 
CAGTTTTATT TAAATGCGGA TATTCAACGC ACGATCCCAA AGGAAGTGGT GATTAGCCAC 
AACTTTGAAG AATTACATGA ACTTGAAGCG GCGGTTTCTG AGGCGCTAGA TAAAAAGTTT 
TCGATTAAGA CCAATGTGCG CGCCGACAGG GCAAGTTTCT TGCGGTTAGC GGTGACCAAT 
GCGACGAATG CCGTGGTTAC GCGCTTGTCC CATAAAAACA CGGTCGAGCA GCGTTTTGTG 
TTACTCGAAG AAATCCTTGA ATTGAGTACG CCTATTCAGC GGATGGAATG TTTTGATATC 
AGTCATACCA TGGGGGAGAG CACGGTTGCC TCCTGTGTGG TGTTCAATCG GGAAGGGCCG 
CATAAAGGTG AATATCGTCG CTATAATATC GAGGGTATTA CACCGGGCGA TGATTACGCG 
GCAATGAAGC AAGCGGTGAG CCGACGCTTC GATAAGATTG AGGCGGGCGG TAAAATCCCT 
GACATTCTGT TTATCGATGG TGGACTTGGG CAGTTGCGTA TCGCCCAGAA GATAGTGGAT 
GAAAAGTTTG TCCATTTAGA TAAAGCACCG CAGCTCATTG GGGTGGCGAA AGGTGAGGGC 
CGTAAACCTG GGCTCGAAAC CTTGATTTTA GGGGATACAG AAACCAGCTT TTCCCTCGAA 
GGTGATTCGC CCGCGTTGCA CCTGATTCAA CATATTCGCG ATGAGTCCCA TCGATTCGCG 
ATAGCTGGCC ATCGTAATCG TCGCCAGAAA ACCCGCAATA CTTCCACATT GGAATCTATT 
CCAGGAATTG GCCCTAAACG CCGTAAAGCT TTGTTACAGC ATTTAGGTGG GTTGCAAGAA 
GTGAAAGGGG CAAGTGTGGC GGAATTAGTC AAAGTACCAG GGATCAGCAT AGAAATGGCA 
CAAACCATTC ATGATGCATT GCGAGGGTGA 

 

Protein sequence

MSNEFNAQSF LRTVSSSAGV YRMYDVKNDV IYVGKAKDLK KRLTSYFRKN LANVKTQALV 
SHIHHINVTL THSETDALLL ENDYIKQYMP KYNVLLRDDK SYPYILLSQH EHPRLAYHRG 
PQREKGHYFG PYPNGGAVRE SLHLMQKLFP IRQCDDLYYK SRSRPCLQYQ LSRCSAPCVG 
KVSNADYDEQ VKLASLFLKG KDQQVISALV DKMELAAERQ AYEQAARFRD QIMALRKVAE 
QQEVSNNKGD MDVIGVHYSS GIACFHLLFI REGKIFGSRS YYPSVPAQTD MDEVLRSFIL 
QFYLNADIQR TIPKEVVISH NFEELHELEA AVSEALDKKF SIKTNVRADR ASFLRLAVTN 
ATNAVVTRLS HKNTVEQRFV LLEEILELST PIQRMECFDI SHTMGESTVA SCVVFNREGP 
HKGEYRRYNI EGITPGDDYA AMKQAVSRRF DKIEAGGKIP DILFIDGGLG QLRIAQKIVD 
EKFVHLDKAP QLIGVAKGEG RKPGLETLIL GDTETSFSLE GDSPALHLIQ HIRDESHRFA 
IAGHRNRRQK TRNTSTLESI PGIGPKRRKA LLQHLGGLQE VKGASVAELV KVPGISIEMA 
QTIHDALRG