| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal_2516 |
|---|
| Symbol | sdhB |
|---|
| ID | 4843582 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS155 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009052 |
|---|
| Strand | - |
|---|
| Start bp | 2940449 |
|---|
| End bp | 2941156 |
|---|
| Gene Length | 708 bp |
|---|
| Protein Length | 235 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 640119739 |
|---|
| Product | succinate dehydrogenase iron-sulfur subunit |
|---|
| Protein accession | YP_001050878 |
|---|
| Protein GI | 126174729 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0479] Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit |
|---|
| TIGRFAM ID | [TIGR00384] succinate dehydrogenase and fumarate reductase iron-sulfur protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.0214113 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAATTGA CATTTGCAGT TTATCGCTAC AATCCTGACG TAGATACTAA ACCGTATATG
CAGGATTACA CCTTAGAAGT GGCTGAAGGC TCTGACATGA TGGTGCTCGA TGCACTGATC
AAGTTAAAAG AGCAAGATCC GACTCTGTCA TTCCGTCGCT CATGCCGTGA AGGTGTGTGT
GGTTCTGACG GCGTTAACAT GAATGGTAAA AATGGTCTGG CGTGTATTAC CCCAATTTCA
ACCTTTAAAG GGAAGAAATT AGAAATACGC CCATTACCAG GTATGCCAGT TGTTCGTGAC
TTAGTCGTTG ATTTAACTCA GTTCTATAAG CAGTATGAGA AGATCAAGCC TTACCTCATC
AATGATGAGA AAGCACCAGC CCGTGAACAC TTACAATCAC CTGAAGAGCG TGCTCATTTA
GATGGTCTGT ACGAATGTAT CATGTGTGCC TGTTGTTCTA CGGCTTGCCC ATCATTCTGG
TGGAATCCTG ATAAGTTTAT CGGTCCAAGC GGTCTGCTTC ACGCATATCG TTTCTTGATC
GACAGTCGCG ATACAGCAAC AGAAGAACGT TTATCTGAGC TGGACGACGC CTATAGCGTG
TTCCGTTGCC ACGGCATCAT GAACTGCGTT GACGTTTGTC CAAAAGGTCT TAATCCGACT
AAAGCAATTG GTCATATTAA GTCCATGCTG TTGAAGCGAG CAGTGTAA
|
|---|
| Protein sequence | MKLTFAVYRY NPDVDTKPYM QDYTLEVAEG SDMMVLDALI KLKEQDPTLS FRRSCREGVC
GSDGVNMNGK NGLACITPIS TFKGKKLEIR PLPGMPVVRD LVVDLTQFYK QYEKIKPYLI
NDEKAPAREH LQSPEERAHL DGLYECIMCA CCSTACPSFW WNPDKFIGPS GLLHAYRFLI
DSRDTATEER LSELDDAYSV FRCHGIMNCV DVCPKGLNPT KAIGHIKSML LKRAV
|
|---|
| |