| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal_2496 |
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| Symbol | |
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| ID | 4842294 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS155 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009052 |
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| Strand | - |
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| Start bp | 2915280 |
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| End bp | 2917922 |
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| Gene Length | 2643 bp |
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| Protein Length | 880 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640119719 |
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| Product | DNA topoisomerase I |
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| Protein accession | YP_001050858 |
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| Protein GI | 126174709 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0550] Topoisomerase IA |
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| TIGRFAM ID | [TIGR01051] DNA topoisomerase I, bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGTAAAT CGCTAGTTAT TGTCGAATCA CCGGCCAAAG CTAAGACTAT TAATAAATAT
CTTGGCAAAG AATTCATCGT TAAATCGAGC GTAGGTCACA TCCGTGATCT GCCGACATCA
TCGACTTCAG AAGGCAATGA AAAGGTTAAA TCCGCTGCCG AAGTTAAGAA AATGTCGCCA
GAAGAAAAAG CTCAATATAA AAAGGTGAAA GATCAGCAAG CGCTGGTGTC TCGCATGGGC
GTAAACCCTG AAAAGGGCTG GGCAGCTAAG TATCAAATTT TGCCGGGCAA AGAAAAGGTC
GTTAAAGAGT TACAGGCACT TGCCGATTCT GCCGACCAAA TCTATCTTGC AACCGACTTA
GACCGTGAGG GAGAAGCTAT CGCCTGGCAT TTGCAAGAGG TGATTGGCGG GGATCCTTCA
CGGTATCAGC GTGTGGTTTT CAACGAAATT ACTAAGTCTG CGATTCAAGA CGCTTTTAGC
AAGCCGTCGA CACTCGACAC TAACATGGTT AATGCCCAGC AAGCTCGTCG CTTCTTAGAC
AGAGTTGTCG GTTTTATGGT GTCGCCACTG CTGTGGAAAA AAGTCGCTCG CGGTTTATCC
GCTGGACGAG TACAGTCGGT TGCCGTTCGC TTAGTGGTTG AACGTGAAAG CGAAATTAAA
GCCTTTGTGC CGGAAGAGTT CTGGGATGTA CATGCAGAGC TGAGTACGCC CGCTCAAGAA
GCCTTGCGGA TGGAAGTGGT TAAGCATTTA GATGCGGCCT TTAATCCTAT CAATGAACAG
CAAGCGATGG CGGCGGTTCA AGCGTTATCC GCGGCGAGTT TTACCGTGCT GGCCCGCGAA
GACAAAGCGA CCCAAAGCAA ACCTTCTGCG CCTTTTATTA CATCGACATT GCAACAGGCG
GCGAGTACGC GCTTAGGTTT CGGTGTGAAG AAGACCATGA TGATGGCTCA GCGACTTTAT
GAAGCTGGTC ATATCACTTA TATGCGTACC GACTCGACCA ATTTGAGTCA AGAAGCCGTT
GAAAACTTGC GTGATATGAT TGCCAAAGAG TTTGGTGATA AATATCTACC CGCGGAACCC
ATTCGCTACG GTTCTAAGGA AGGCGCACAA GAGGCTCACG AAGCGATTCG TCCATCGAAC
GTTCATGTAC AAGCGGCGAC CTTATCGGAC ATGGAGCGTG ATGCTCAGCG TCTATATGAG
CTGATTTGGC GTCAATTTGT GTCGTGTCAG ATGACGCCAG CCCAATATGA TGCTACTAAG
TTGACCGTAA AAGCGGGTGA CTATGAGCTG AAGGCTACTG GACGTACTTT ACGTTTTGAT
GGTTGGACTC GCGTGCAAAC AGCACTTAAG AAGAAAAACG AAGAAGACAA TACGTTGCCA
TTTGTGGCAC AAGGTGATGT ATTAGCGTTA AAAGAGTTGC AACCTAAGCA ACACTTTACT
AAGCCGCCAG CTCGATACAG CGAAGCCTCT TTAGTTAAAG AATTAGAAAA ACGCGGCATT
GGCCGCCCAT CGACCTACGC AACTATTATT TCAACGATTC AAGATCGGGG TTATGTAAAA
GTTGAGAATC GTCGTTTCTA TGCCGAAAAA ATGGGTGAAA TTGTCAGCGA GCGATTAGTC
GGCAGTTTTG CGGATTTAAT GAGCTATGAC TTTACCGCCA GTATGGAGCA AACATTAGAC
GATGTGGCTC GCGGCGAATT AGATTGGAAA AAAGTGCTCG ATGGCTTCTA TGCTGACTTT
ACTAAGCAAT TAGAAAAAGC GGAGCTGGAT CCCGAAGAAG GTGGCATGCG TCTTAACCAA
ATGGTGATGA CGGATATCAA GTGCCCAACC TGTGGTCGCT CTATGGGTAT TCGTACAGGT
ACGACTGGTG TTTTCCTTGG TTGCTCTGGT TACGAATTAC CTCCCAAAGA GCGCTGTAAG
ACAACGATGA ACCTTACGCC TGGCGTTGAG GCGATTAGCG AAAACAGTGA AGATGCCGAG
ACTGATGCAC TGCGTGCGAA GCACCGCTGT AGTATTTGCG GCACAGCAAT GGACAGTTAC
CTAATTGATG AGAAGCGTAA GCTACACGTC TGTGGTAACA ACCCGATTTG TGAAGGCTAT
GAAGTCGAAG AAGGCCAATT CAAGATCAAG GGCTATGAAG GTCCGCTGAT TGAGTGTGAT
CGCTGTGGCC ACGACATGGA ACTGAAAAAC GGCCGTTTTG GTAAGTATTT TGGTTGTACC
AATAGCGAAT GTAAAAATAC GCGTAAATTA CTGAAGAACG GCGAGGCTGC GCCACCAAAA
GAAGATCCTA TCTATTTGCC TGATCTGAAA TGCAGCAAAT CGGATGCCCA TTTCGTATTA
CGTGATGGTG CAGCAGGGAT CTTCTTAGCG GCCAGTACCT TCCCTAAATC ACGGGAAACC
CGTGCACCTC TGGTTGAAGA GCTGGTTCAA TACCGCGAGC TGCTGTGGCC TAAGTATCAA
TATTTAGCTG ATGCCCCCGT CACTGATGAC GAAGGCAATA AAGCAGCGGT GAAGTTTAGT
CGTAAGACGA AAGAGCAATA CGTTGCGACT GAAGTCGACG GCAAAGCCAC TGGTTGGTCA
GCGCATTACG TTAATGGCAA GTGGGTGAGT GAGACTACCA AGAAAGCCAA GAAAAGCGCA
TAG
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| Protein sequence | MGKSLVIVES PAKAKTINKY LGKEFIVKSS VGHIRDLPTS STSEGNEKVK SAAEVKKMSP
EEKAQYKKVK DQQALVSRMG VNPEKGWAAK YQILPGKEKV VKELQALADS ADQIYLATDL
DREGEAIAWH LQEVIGGDPS RYQRVVFNEI TKSAIQDAFS KPSTLDTNMV NAQQARRFLD
RVVGFMVSPL LWKKVARGLS AGRVQSVAVR LVVERESEIK AFVPEEFWDV HAELSTPAQE
ALRMEVVKHL DAAFNPINEQ QAMAAVQALS AASFTVLARE DKATQSKPSA PFITSTLQQA
ASTRLGFGVK KTMMMAQRLY EAGHITYMRT DSTNLSQEAV ENLRDMIAKE FGDKYLPAEP
IRYGSKEGAQ EAHEAIRPSN VHVQAATLSD MERDAQRLYE LIWRQFVSCQ MTPAQYDATK
LTVKAGDYEL KATGRTLRFD GWTRVQTALK KKNEEDNTLP FVAQGDVLAL KELQPKQHFT
KPPARYSEAS LVKELEKRGI GRPSTYATII STIQDRGYVK VENRRFYAEK MGEIVSERLV
GSFADLMSYD FTASMEQTLD DVARGELDWK KVLDGFYADF TKQLEKAELD PEEGGMRLNQ
MVMTDIKCPT CGRSMGIRTG TTGVFLGCSG YELPPKERCK TTMNLTPGVE AISENSEDAE
TDALRAKHRC SICGTAMDSY LIDEKRKLHV CGNNPICEGY EVEEGQFKIK GYEGPLIECD
RCGHDMELKN GRFGKYFGCT NSECKNTRKL LKNGEAAPPK EDPIYLPDLK CSKSDAHFVL
RDGAAGIFLA ASTFPKSRET RAPLVEELVQ YRELLWPKYQ YLADAPVTDD EGNKAAVKFS
RKTKEQYVAT EVDGKATGWS AHYVNGKWVS ETTKKAKKSA
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