Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal_2179 |
Symbol | |
ID | 4842946 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS155 |
Kingdom | Bacteria |
Replicon accession | NC_009052 |
Strand | + |
Start bp | 2524491 |
End bp | 2525408 |
Gene Length | 918 bp |
Protein Length | 305 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640119395 |
Product | transposase, IS4 family protein |
Protein accession | YP_001050544 |
Protein GI | 126174395 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.602242 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGGCAAAT CAATACGTAA AATCGTTAAT TGGAAGCAAT ACAACCAAGC GTTAGTGAAC CGTGGTTCGC TCACCTTTTG GGTGGATGAA GCTGCAGTAA ACACGTGGTA CTGTCATGAG CATCATGGCG GGCGTGGACG CGGGTTTAGC TATAGTGATG TGGCGATTGA AACCGCGTTG ATGGTCAAAG GCATCTTTAA TTTATCGTTG CGTGCGCTAG AAGGCTTTCT CAACTCATTG TTTACATTGA TGAGTGTGCC ACTTAAATCC CCCGATTACA CTTCTATCAG TAAACGCGCT AAGACAGTCA ATATCAAGTA CCGCAACCCT AGTCGCGGAC CGATAGCGCA TGTGGTTGTC GATGCCACGG GCCTGAAAGT GTTTGGTGAA GGCGAATGGA AAACGCGCAA GCATGGCAGC GAAAAACGCC GCACATGGCG CAAGTTGCAC TTAGCCATCG ATGCAAGCAC TCACGAAGTC GTTGCCGCTG AAGTCAGTCT TGTGTCAGTA GGCGATAATG AAGTACTACC GACTTTACTC AATCCTTTAC GGCGAAAGAT AACGCAGGTA TCGGCAGATG GGGCTTATGA TACAAAGGGT TGTTATCAAT TACTGCGACG TAAAGGCTGC AAAGCTACCA TCCCCCCGCG CTCAAATGCG GGGTTATGGG AAAAGAGGCA TCCACGCAAT GAAGCGGTAG AAGCACTGAA AGCGGGTCAG CTGAAACACT GGAAAATCGA TAACGGCTAT CACCAGCGCT CTCTAGCAGA GACCGCCATG GGCCGATATA AACAGTTGAA TAGTCCAATG CTGAGTTTAC GTGATTACAA TGGGCAAGTT GCAGAGGCAT TGGCCGGTGT GAAGGCGATG AACAAAGTCA TTAGACTGGG TATGCCCGTT CGCCAGCAAG TTGCTTAA
|
Protein sequence | MGKSIRKIVN WKQYNQALVN RGSLTFWVDE AAVNTWYCHE HHGGRGRGFS YSDVAIETAL MVKGIFNLSL RALEGFLNSL FTLMSVPLKS PDYTSISKRA KTVNIKYRNP SRGPIAHVVV DATGLKVFGE GEWKTRKHGS EKRRTWRKLH LAIDASTHEV VAAEVSLVSV GDNEVLPTLL NPLRRKITQV SADGAYDTKG CYQLLRRKGC KATIPPRSNA GLWEKRHPRN EAVEALKAGQ LKHWKIDNGY HQRSLAETAM GRYKQLNSPM LSLRDYNGQV AEALAGVKAM NKVIRLGMPV RQQVA
|
| |