Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal_2109 |
Symbol | |
ID | 4842665 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS155 |
Kingdom | Bacteria |
Replicon accession | NC_009052 |
Strand | - |
Start bp | 2448975 |
End bp | 2449916 |
Gene Length | 942 bp |
Protein Length | 313 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640119325 |
Product | integrase catalytic subunit |
Protein accession | YP_001050477 |
Protein GI | 126174328 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2826] Transposase and inactivated derivatives, IS30 family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATTATC AACAGTTGAC CGAAGCAAGA CGATACCAGA TTTCCGTGCT GTTAGAACAG GGCTTTTCGA TAGCACACAT AGCTAAATGC ATTGATTGTC ATCGCTCTAG TGTCTATAGG GAAGTTAAAC GATGCCAAGG GCAATCACGC TATCAGCCTG ATATTGCACA CAAGCAGGCT GTCACAATGA GGCGTCAGTC GAGTAAATAT GCGATACCCT CACAGCGAAT AGAGAGCATC ATCCTTTTGC TGCAATTGGA TTGGAGCCCG GAGCAAATTT CGCAGGTGTT GCGTCTGGTG AAGGAGCCCG TCAGTCACGA GTGGATTTAT CGCTATATTG CACGCGATAA ACGCCGTGGT GGCAAACTTT ATCGTCATTT ACGTCAAGGA CATAAGCGTT ATCGGCGCGG TAAAGTAGAG CAAGCTCCTA CCATAAAAAA CGCCGTATCC ATTGACGACA GACCAGCCAT TGTTGATAGC CGAGAGCGAT TTGGTGACTG GGAAATCGAC ACCGTATTGG GGCTGCATGG AACGGGTTCG ATTGTAACCC TATTAGAGCG TAAGACTCGG TTTTATTTGA TAAAGAAAGT CAATTCGAAG TCAGCGGCAG ATGTAACGAA AGCGACGATT GAGTTACTGA TGCCCTATAA GGCGCATGTG CTGACAATCA CGGCAGATAA TGGACGCGAA TTTGCTCACC ACCAAGAGAT AGCAGAGGCG CTAGATACAC AGGTGTATTT TGCGCACCCT TATCGTTCTT GTGAACGAGG AGCGAATGAA AACGCCAATG GATTACTGCG GCAGTACGTC AAAAAAGGGG TTGATTTGAG GCTAGTGAGT GATGAATTAA TCGAATTTGC TCAGAATAGA ATTAACTATC GACCCAAAAA GTGTTTGAAG TTTAAGCAGC CTGCGGTGGT ATTTCACCAA TTAGCTGCTT AA
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Protein sequence | MNYQQLTEAR RYQISVLLEQ GFSIAHIAKC IDCHRSSVYR EVKRCQGQSR YQPDIAHKQA VTMRRQSSKY AIPSQRIESI ILLLQLDWSP EQISQVLRLV KEPVSHEWIY RYIARDKRRG GKLYRHLRQG HKRYRRGKVE QAPTIKNAVS IDDRPAIVDS RERFGDWEID TVLGLHGTGS IVTLLERKTR FYLIKKVNSK SAADVTKATI ELLMPYKAHV LTITADNGRE FAHHQEIAEA LDTQVYFAHP YRSCERGANE NANGLLRQYV KKGVDLRLVS DELIEFAQNR INYRPKKCLK FKQPAVVFHQ LAA
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