Gene Sbal_1943 details

Gene Information

• Locus tag: Sbal_1943
• ID: 4844121
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella baltica OS155
• Kingdom: Bacteria
• Replicon accession: NC_009052
• Strand: +
• Start bp: 2257681
• End bp: 2258325
• Gene Length: 645 bp
• Protein Length: 214 aa
• Translation table: 11
• GC content: 45%
• IMG OID: 640119163
• Product: two component LuxR family transcriptional regulator
• Protein accession: YP_001050316
• Protein GI: 126174167
• COG category: [K] Transcription; [T] Signal transduction mechanisms
• COG ID: [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain

Plasmid Coverage information

• Num covering plasmid clones: 25
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGAATTTA GTCATGGTAA AGTGATCAAT ATTTTAGTGG TCGATGATCA TTCGTTGATT 
TTCGACGGAT TACTGGGTTG TTTAGCGCCT TATCCAGAGC TTAATCTAAT TGGATCGGTT 
GAAGATGGGC TCGCGGTATA CGAGAAATGC CTCAAACTCA GACCAGATCT GGTTTTTATG 
GATCTGAAAT TACCGGGAAT GGGTGGATTT GACGTGATTC GTCAGCTCAG ACAACGTTGG 
CCAGAGATGA TGATTATCAT GTTAACGGCG ACGGTTGAGG AAAAAAGTGC GCGGGAAGCG 
CTCGATGTCG GCGCCAATGG TTATGTGTTA AAATATAGCC CTAAGAGCAC GCTGTTAGCG 
GCAATCAAAT GTGTATGTAA GGGTAAAAAC TTTATCGATC CTAGCTTAGA TGAGAGACAA 
ATTGCTGCTT TGAGTGGGGT AGTCGATGGG GATATGCCTT TGCTGACCCC CCGCGAGCAA 
CAAGTGCTAA AACTCATCTG TGAGGGGCGC CGCAACCGTG ATATTGCCGA AGATTTAGTG 
ATTGGTTTAA AAACGGTAGA GACTCACAGG ATGAATTTAA TGCGCAAACT TAATGCGCAT 
AACGTCGCCG AGTTAATGCA TTGGGTACAA AGGCTTGGAT TATGA 

 

Protein sequence

MEFSHGKVIN ILVVDDHSLI FDGLLGCLAP YPELNLIGSV EDGLAVYEKC LKLRPDLVFM 
DLKLPGMGGF DVIRQLRQRW PEMMIIMLTA TVEEKSAREA LDVGANGYVL KYSPKSTLLA 
AIKCVCKGKN FIDPSLDERQ IAALSGVVDG DMPLLTPREQ QVLKLICEGR RNRDIAEDLV 
IGLKTVETHR MNLMRKLNAH NVAELMHWVQ RLGL