Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal_1838 |
Symbol | |
ID | 4843680 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS155 |
Kingdom | Bacteria |
Replicon accession | NC_009052 |
Strand | - |
Start bp | 2133434 |
End bp | 2134633 |
Gene Length | 1200 bp |
Protein Length | 399 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 640119059 |
Product | cystathionine beta-lyase |
Protein accession | YP_001050213 |
Protein GI | 126174064 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0626] Cystathionine beta-lyases/cystathionine gamma-synthases |
TIGRFAM ID | [TIGR01324] cystathionine beta-lyase, bacterial |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACAGATA AACATCATCA AGCCACCCAA ATCGTCAGCT TAGGTCGAGA CAAAAAATGG ACCAAAGGCG TGATCAATCC GCCCGTTTTT CGTGCTTCGA CTATCGTCTT CGAAACGATG GATGAAATGC GCCACGCCGC GAAAAATAAA ACCAACGGCG AGATGTTTTA TGGCCGCCGT GGTACCCCGA CCCATTTTTC GTTTCAAGCG GCGATTACTG AATTAGAAGG CGGCGTCGGT ACAGCGCTGT ATCCCTCTGG CGCGGCGGCG ATCAGTGCGG CGTTATTGTC ATTTTTAAAA GCGGGCGATC ACCTATTGAT GGTCGATAGC GTGTATGAGC CAACGCGGGA TCTGTGTACC CATATTCTCG GCAGTTTTGG TATCGAAACC ACTTATTACA ATCCGCTGAT TGGCGCGGGC ATTCGCGACC TTATTCGCCC CAATACTAAA GTGTTGTTTT TAGAGTCACC AGGCTCCATC ACCATGGAAG TGCAAGATGT ACCGACCTTG TGCCGCATCG CCCACGAACA TGGGCTGATT ACTATGCTGG ACAACACTTG GGCATCCCCA ATCAACAGCA AGCCCTTTGA AATGGGTGTA GATATCTCAA TTCAAGCGGC GACCAAATAC ATTGTCGGTC ACTCGGATGT GATGATAGGC ACAGCTACCG CCAACGAAAA ATACTGGCCA CAATTGCGCG AACACAGCTA TTTGATGGGA CAAACCACCT CCCCTGATGA TGTGTACCTT GCCGCCCGTG GCCTGCGTAC CTTAGGCGTG CGTATGGCGC AGCATGAAAA AAATGCCCTG CAAGTTGCCA ACTGGTTGAA AACCCGACCA GAAGTCGATC ATCTGCGTCA TCCGGCGTTT GATACCTGCC CTGGCCATGA GTTCTTTAAA CGCGACTTCA GCGCCTCCAA CGGTTTATTC TCCTTTGTAT TGAAACAAGG AGATGCCGAT GCGGTCACCG CACTGGTTGA GAATATGAGT CACTTTAAGA TGGGCTTTTC TTGGGGCGGC TACGAGAGTT TGATCCTCGG CATTTTCGGC ATTGAAAAAA TTCGCTCGGC GACCAAGTGG GATGCGAGCA AACCGTTAAT TCGTTTGCAT ATTGGTTTAG AAGATCCCGC GGATTTAATT GCCGATCTCA GTGCAGGGTT TGAACGCTTT AACGCAGTAC TGGCGGCCAA AGCTAAGTAG
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Protein sequence | MTDKHHQATQ IVSLGRDKKW TKGVINPPVF RASTIVFETM DEMRHAAKNK TNGEMFYGRR GTPTHFSFQA AITELEGGVG TALYPSGAAA ISAALLSFLK AGDHLLMVDS VYEPTRDLCT HILGSFGIET TYYNPLIGAG IRDLIRPNTK VLFLESPGSI TMEVQDVPTL CRIAHEHGLI TMLDNTWASP INSKPFEMGV DISIQAATKY IVGHSDVMIG TATANEKYWP QLREHSYLMG QTTSPDDVYL AARGLRTLGV RMAQHEKNAL QVANWLKTRP EVDHLRHPAF DTCPGHEFFK RDFSASNGLF SFVLKQGDAD AVTALVENMS HFKMGFSWGG YESLILGIFG IEKIRSATKW DASKPLIRLH IGLEDPADLI ADLSAGFERF NAVLAAKAK
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