| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal_1591 |
|---|
| Symbol | |
|---|
| ID | 4842655 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS155 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009052 |
|---|
| Strand | - |
|---|
| Start bp | 1856094 |
|---|
| End bp | 1858013 |
|---|
| Gene Length | 1920 bp |
|---|
| Protein Length | 639 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 640118807 |
|---|
| Product | decaheme cytochrome c MtrF |
|---|
| Protein accession | YP_001049974 |
|---|
| Protein GI | 126173825 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR03507] decaheme c-type cytochrome, OmcA/MtrC family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.0000158979 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACAAGT TTGCAAAAAT GAGCACTCAA TTCAGTCTGA TGCTGGCCTT AGTCTCGCTA
TTAAGCGCCT GTGGCGGTGA TAAGGGCCAA GATGTTAATC CCGGTGAACC CGCAAAACCA
CCCGCATTAA TCATCACTAG CCTAAAGGTC ATGGTCGATA AAGTCGCGAT AACAGATGGC
ATTGCTCAAG TGGATTTTCA AGTGAGCAAT CAAGATGATG AAGCCGTAAT TGGTGTCCCA
TCGGCGACGT TTATTGCGGC GCAGCTTCTC CCCCAAGGCT ATACAGGTGC GGGAAATAGC
AGTGAATGGC AACATTTTAC CGCTGAAACC TGCGCGGCAA CTTGCCCAGG CAGTCTCACA
GATCATAAAA ACGGTCACTA CAGTTACACC TTCAGCGCCA CGTTTAATGG CATGAATGGG
GTGACGTTTA TGCCAGAAGC GACCCAAAGA ATGGTGGTCA AAATCGGCGG CGATAAACTT
GCCGATAACA CGCCCTTGCC TATTACCAAT CAACATTATG ACTGGCAAAC TTCTGGGGAT
AATGTCGCTT ACACCCGCAA CTTAGTCACA ATAGAAACTT GTAATAGTTG CCACAGCAAT
CTTGCTTTCC ATGGCAGTAA ATATAATCAA ATCGAAACCT GCGTCACCTG TCATAACAGC
AAAAAAGTCA GTAACCCTGC GGATATTTTC CCGCAAATGA TCCACAGCAA GCATTTAACC
GGTTTCCCGC AACCCATCAG TGACTGCCAA ACCTGTCATG TCGATAAGGC AGAGTTAGCT
GAGCAGCAAA ACTGGCACAG AGTCCCAACC ATGCAAGCCT GCGGCGCCTG TCATACACAA
ATTAATTTTC CCGCAGGCGA AGGACACCCA GTGCAGGCTG ATAACAGTAA CTGCGTGGCG
TGCCATAATG CAGACTGGAC CGTAAGCGTT CACAGTGATG AAGACAAAAC TGCGGCACTG
ATGCAATTTA GCCCAAGCAT CACCAGCGCC AGTATGGATG CCAATGGTAC AGTCACCGTC
GCGGTTGAAT TGATGAACCC AGCTACTGGC TCCGTCTACA GCGACAGTGC CGATAAGCTA
AAATTCATTA ATGATTTAAG GGTATATGCC AACTGGGGAA CCAGTTTTGA TTATGCCACT
CGCTCTGCCC GCTCGATTAA GCTGCCGGAA TCCACCCCAG TGTCAGGCTC AAATGGCATT
TATACCTATA CGATTTCGGG TCTTACTGTG CCTGCGGGCA CTGAAGCGGG TCACGGCGGA
CTCGCGATTC AAGGCCGAGT CTGCGCCAAA GACAAAGTAC TCGTTGATTG CACGACTGAC
CTGGCGGAAG TGTTAGTGAT TAAAGCCAGC CACAGTTATT TTGATATGGC AGCATTAAGC
AGTACGGGTC GCCGCACTGT TGTCAGTAAT GCAAGCTGCG GTAATTGCCA TGGCGATCAA
AAGCTTAATA TTCACGGCTC ACGCAACGAT CTCGGTGGTC AATGTCAGCT ATGTCATAAC
GCCAATATGC TGGCTGATGC GACGGCGGCA AATCCTTCCA CCACGTCGTT TGACTTTAAG
CAGCTGATCC ACGGTATTCA CACCAGCCAA TTCGCAGGTT TTGAAAACCT AAACTACCCA
GGGAAAATCG GTAACTGTGC CCAATGCCAT GTTAACGATT CTGCGGGGAT ATCTACCGTC
GCCCTTCCCT TAAATTCAGC GGTACAACCC CTTGCCCTCG ATAACGGCAC TTTTACCAGC
CCAATTGCCG CTGTGTGTAG CAACTGCCAT TCAGATACCA GCACTCATAA CCACATGGCT
CAGCAAGGTG CTGTTTTTGC TGGTACAAAA GCCGATGCAA CCGCAGGAAC TGAAACCTGT
GCTTTCTGTC ATGGACAAGG CGGAGTCGCG GACGTGTTAA AAGTGCATCC CATAAACTAA
|
|---|
| Protein sequence | MNKFAKMSTQ FSLMLALVSL LSACGGDKGQ DVNPGEPAKP PALIITSLKV MVDKVAITDG
IAQVDFQVSN QDDEAVIGVP SATFIAAQLL PQGYTGAGNS SEWQHFTAET CAATCPGSLT
DHKNGHYSYT FSATFNGMNG VTFMPEATQR MVVKIGGDKL ADNTPLPITN QHYDWQTSGD
NVAYTRNLVT IETCNSCHSN LAFHGSKYNQ IETCVTCHNS KKVSNPADIF PQMIHSKHLT
GFPQPISDCQ TCHVDKAELA EQQNWHRVPT MQACGACHTQ INFPAGEGHP VQADNSNCVA
CHNADWTVSV HSDEDKTAAL MQFSPSITSA SMDANGTVTV AVELMNPATG SVYSDSADKL
KFINDLRVYA NWGTSFDYAT RSARSIKLPE STPVSGSNGI YTYTISGLTV PAGTEAGHGG
LAIQGRVCAK DKVLVDCTTD LAEVLVIKAS HSYFDMAALS STGRRTVVSN ASCGNCHGDQ
KLNIHGSRND LGGQCQLCHN ANMLADATAA NPSTTSFDFK QLIHGIHTSQ FAGFENLNYP
GKIGNCAQCH VNDSAGISTV ALPLNSAVQP LALDNGTFTS PIAAVCSNCH SDTSTHNHMA
QQGAVFAGTK ADATAGTETC AFCHGQGGVA DVLKVHPIN
|
|---|
| |