Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal_1313 |
Symbol | |
ID | 4843183 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS155 |
Kingdom | Bacteria |
Replicon accession | NC_009052 |
Strand | + |
Start bp | 1491046 |
End bp | 1492791 |
Gene Length | 1746 bp |
Protein Length | 581 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 640118533 |
Product | diguanylate cyclase |
Protein accession | YP_001049700 |
Protein GI | 126173551 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2199] FOG: GGDEF domain |
TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.386041 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCCTTAA TGGCTGCAAC TATCAATTTT GATGAGGCGT TAGCAGAGCT GGAGCAACTA CAACATACCG ATCTACCCAG CGCTATTACT AAGCTCCATG AACTTGAAGC TGATTTCGAG CATATGACGC GCTTTCAACA AGGGCGCTTA TTGGTATTTA AAGGGACTTC ATTTATTTAT GCAGGTCAAT ATCAAGAAGC CCTAGTGACT TTAATTCAAT CTGAAAATTT AGTTCAAAAT AGCGATTATT TATTTTCTGC CTATAGCTAT GAGGCAACAG CTTACATCGC CCTTAGGAAC TTTAAAGACG CTTTTGTTGT AATGAGCAAA AGCCTAGGGT TAATAGATCG AATAGAAAAC ATAGACATCA AACGTGCTGC ATATCTACGT TTAGCCAGTT TATACTCTGC AATGGGTATT AAGGAAGAGG TGGGAAGCTA CGCGGCTAAG GCAGAATCGC TTGCTTCTGC AGATGATGTA AAAGATATCT GTACTGCAAA GTTGTATTTA TCTGTTTATC AATTAGAGCT AGAGGCCTTT ACTAAGGCGT TTGATGAATT CCAGTACACA CATGATTTTT TTGAGTCTAA TGGCTTCCCA TTGATTTCGT TTATTGCATT GAAAGGGATG GGTGAGTCTA AGTTAAGGTT GCAAGAATAC TCTGCTGCAG TTGCTTTACT TTTGAAAGCA TTAAAGGGAT ATGAGTCTTT TAATTTTCAA CTAGAAATTA ATAGTGTCCA TTCTTTGTTA ACCGAAGCGT ATTTTGCACT AAAGCAATCT GCTGAGGTGG TCGAGCATGC CAAGTTCGTT ACGTCATTAC CTAATGATCC TAGTTATACC GAGTTAAAAC ATACTGTCTT TAAAGTGTTA GCGGGCTTAA ATGCTGAGAA TAAACAATTT GAACAAGCCT ATGAGTTCTC GAAAAAAGAG CAGTATTACA ATCAGCTGAT GTTTGATGAA GCGAAAATGA AAACGTTAGC GTATCAGGCG GCAAAGTTTA ATGCTGATGA ACAGTCACGT GAAATTAATT TATTGAATAA GGAACGTGAA CTGTATGTCG CTCAGCAAAC GGTAAAAGAG CGCGAATACA CCAATATGCT GATGTTTGTC ACTATTTTAG TGGGCGGGTT ATTTTTCCTC GGGATTTTGT TAGCTGTAGG CCAGATGCAG AAACGCAAGT TTATGCGTAT GGCGAGAATG GATGCATTGA CGGGCATCTT GAATCGCGGT GCAGGGCAAG AATTAGGGGA AAACCTTTTT GTGCAAGCCA CGGCCCGCGG TGGGGATTTC TGTGTCATTT TATTTGATTT GGATTTCTTC AAACGCATCA ACGATTCTTT TGGCCATGGA ACTGGCGATT GGGCGCTTAA AAAAGTGGTT GACTCCCTTA AATCCCATAT CCGAAATGGT GATGTTTTTG CTCGTATCGG CGGTGAGGAG TTTGCGATTT TATTACCCTA TGCCGATGAA GAGAAAGGTA TGGAAGTGGC AGAGCAGTGC CGAGCCCGTA TCGAGGCCAT TGATACCCAA CATTCAGGAC ATAAGTTCGT CATTACGGCG AGTTTTGGCG TGAGCGGTTT AATGGCTGAT GATCTGAGTT TGGACCCATT ATTTCACCGA GCCGACATGG CGCTTTATGC CGCTAAGGCC AATGGCCGTA ATGCCGTAGT ACGCTATTCT GACATCTTAA AATGTGACAA GCAGGCAACT GATTTACGGC GTCATATCGC ATCGCCCTCG GTGTAA
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Protein sequence | MPLMAATINF DEALAELEQL QHTDLPSAIT KLHELEADFE HMTRFQQGRL LVFKGTSFIY AGQYQEALVT LIQSENLVQN SDYLFSAYSY EATAYIALRN FKDAFVVMSK SLGLIDRIEN IDIKRAAYLR LASLYSAMGI KEEVGSYAAK AESLASADDV KDICTAKLYL SVYQLELEAF TKAFDEFQYT HDFFESNGFP LISFIALKGM GESKLRLQEY SAAVALLLKA LKGYESFNFQ LEINSVHSLL TEAYFALKQS AEVVEHAKFV TSLPNDPSYT ELKHTVFKVL AGLNAENKQF EQAYEFSKKE QYYNQLMFDE AKMKTLAYQA AKFNADEQSR EINLLNKERE LYVAQQTVKE REYTNMLMFV TILVGGLFFL GILLAVGQMQ KRKFMRMARM DALTGILNRG AGQELGENLF VQATARGGDF CVILFDLDFF KRINDSFGHG TGDWALKKVV DSLKSHIRNG DVFARIGGEE FAILLPYADE EKGMEVAEQC RARIEAIDTQ HSGHKFVITA SFGVSGLMAD DLSLDPLFHR ADMALYAAKA NGRNAVVRYS DILKCDKQAT DLRRHIASPS V
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