Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal_1238 |
Symbol | |
ID | 4844573 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS155 |
Kingdom | Bacteria |
Replicon accession | NC_009052 |
Strand | + |
Start bp | 1424196 |
End bp | 1425764 |
Gene Length | 1569 bp |
Protein Length | 522 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640118457 |
Product | methyl-accepting chemotaxis sensory transducer |
Protein accession | YP_001049625 |
Protein GI | 126173476 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0840] Methyl-accepting chemotaxis protein |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0615962 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCATAAAA ATTCTAAGAA TGGTGAAACA CACCTGTCAG ATAATGCGAT TCTACTATCC ACAACGGATT TGAAGGGAAA CATTAAATAT GTGAATCAGA CTTTTTCGCA GATCAGCGAG TTTAGCGCCG CTGAGTTGCA AGGGAATCCC CATAACATAG TGCGTCATCA AGATATGCCA GCGGCTGCGT TTAAGATCCT TTGGGAGCGA ATTAAGCAGG GTAAACCTTG GATGGGGATC GTTAAAAATC GCACTAAAAA TGGCGGTTAT TACTGGGTAA ATGCCTATGT CGCCCCTGTG TATGAAGACG GTAAAATTCA CGAATATCAA TCTGTTCGCC GCCAAGCCAC TCCAGAGCAG ATCAAAGCCG CCGAGAGTAT TTACAGCGAT ATTAATCAGG GTAAGCAACC TAAGGTATTG CGCAAAGACA GGTTAGGTTT CAGTGGCAAG ATACTGCTGG CCATGCTGAT GTCGATTATG ACTACGACAA TAATTGCCAG TTATTCTCCC ATTGTTGCTG CGATTGCGGG GATGACGGTA GCGTGCCTAG CATGGTATTA CCTGATGCAG CCGCTGCAAA AGCTCGTTTC TATGGCGACC AACATTATTG ACGATCCTGT GGCGACGGGC GTGTACACCG GCCGCCAGGA TGAGATTGGA AAATTGGATC TCGCCCTGCG CTTTTTGATC ACCGAAATCG GTGGCGTTGT CGGCCGTATG GCGGATTCGG CCAGTGAAAT ACAATCTCAG AGTGTGAGCC TTAAACAAAC CATTACCAAC ACTTGGGAAC ATGCCGATAG TCAGAGCGAA CAAACAACGC AGGCCGCGAC GGCGATGGAG CAGATGAGCG CCAGTTTTGC CGAAGTGACG GGCAACATTC ATCGTACTGC CTCTGAAATG GTGTCGAGCC ATGAGGCGGC GCAACGCGGG CATTCACGTT TAGAAACAGT GATAGAGGCG ATACATCAGT TGAGTGTGCA AGTGAGCCAC TTTTCCGATG TGGTTCAAAC GATTGAAGAA GATAGCCGTG CGATTCATCA AGTGCTTGAA GTGATACGTG CCATCGCTGA CCAAACCAAC TTGTTAGCTT TAAATGCGGC AATCGAAGCG GCGCGGGCAG GGGATAGTGG TCGCGGTTTT GCAGTGGTGG CCGATGAGGT CAGACAATTA TCGAGTCGTA CTAGCCAATC CACCTCGCAA ATCGAGTTAA TCGTTAGCCG CTTTAGGGAA AGTACCCAAA GGGCGACTTC GACTATGGTG GCGGGACAAG AGCAGGTTAA ACGTTCGGTA GGCTTAGCGC AGGAAGCCAG TGTCGCTTTT GGCGAGCTGC TTTCATCCAT AACAAGGATT AACTCCTTAA GTGATGATAA TGCCGCGGCG ATGACCCAGC AGACTTCTGT GGCCGCTGAA ATTAGCCGTG CCATCCATGT GATCAGCGAT TTGGCTCAAC AGAGTTTAGA GCAGACGCTC GATGCGGCGG CGCGGGGCGA TCAAGTGTCG CGTTTATCGA CCAAGACTCA TCATCTGTCC CAACAGTTTT GGCAGCAGAG TGTGCAACGT AAATATTAA
|
Protein sequence | MHKNSKNGET HLSDNAILLS TTDLKGNIKY VNQTFSQISE FSAAELQGNP HNIVRHQDMP AAAFKILWER IKQGKPWMGI VKNRTKNGGY YWVNAYVAPV YEDGKIHEYQ SVRRQATPEQ IKAAESIYSD INQGKQPKVL RKDRLGFSGK ILLAMLMSIM TTTIIASYSP IVAAIAGMTV ACLAWYYLMQ PLQKLVSMAT NIIDDPVATG VYTGRQDEIG KLDLALRFLI TEIGGVVGRM ADSASEIQSQ SVSLKQTITN TWEHADSQSE QTTQAATAME QMSASFAEVT GNIHRTASEM VSSHEAAQRG HSRLETVIEA IHQLSVQVSH FSDVVQTIEE DSRAIHQVLE VIRAIADQTN LLALNAAIEA ARAGDSGRGF AVVADEVRQL SSRTSQSTSQ IELIVSRFRE STQRATSTMV AGQEQVKRSV GLAQEASVAF GELLSSITRI NSLSDDNAAA MTQQTSVAAE ISRAIHVISD LAQQSLEQTL DAAARGDQVS RLSTKTHHLS QQFWQQSVQR KY
|
| |