Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal_1167 |
Symbol | |
ID | 4845729 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS155 |
Kingdom | Bacteria |
Replicon accession | NC_009052 |
Strand | - |
Start bp | 1346027 |
End bp | 1346722 |
Gene Length | 696 bp |
Protein Length | 231 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 640118387 |
Product | aquaporin Z |
Protein accession | YP_001049555 |
Protein GI | 126173406 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0580] Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) |
TIGRFAM ID | [TIGR00861] MIP family channel proteins |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.56662 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATATGT CACAAAAAAT GGCGGCGGAA TTTCTTGGCA CCTTGTGGTT AGTCCTTGGA GGCTGTGGCA GTGCGGTACT TGCCGCTGCA TTTCCCGAGG TGGGCATAGG CTTACTCGGT GTCGCGTTCG CATTTGGCTT AACTGTTCTC ACTATGGCCT TTGCGATTGG CCATATTTCA GGTTGTCACC TTAACCCAGC GGTGTCATTC GGCCTTTGGG CTGGCGGACG TTTTCCAGCG GCAGAATTAT TGCCCTATAT CATAGCCCAA GTCGCGGGCG GGATTGCAGG GGCGGGTATC TTGTATCTTA TTGCTTCTGG GGAGGAAGGA TTTTCACTCG CCGGCGGATT TGCCTCTAAC GGTTTTGGTG AGCACTCCCC TGGCGGTTAC AGCATGCTGT CGGTCATGAT TTGTGAAGTT GTTATGACAC TGTTTTTCTT AATCATTATT TTAGGTGCCA CCGATGAACG CGCACCCAAA GGGTTCGCCC CGATTGCGAT AGGTCTAGGC TTAACCTTGA TCCACCTTAT CAGTATTCCA GTGTCCAATA CTTCGGTGAA TCCTGCGCGC AGTACAGGTC CTGCGTTGTT TGTCGGTGAC TGGGCGGTAT CGCAGCTCTG GTTATTCTGG GTAGCACCGA TTGTCGGCGC GATTTTGGCA GGCTTTATCT ATCGCTACTT CCGCGCGGCA GAATAA
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Protein sequence | MNMSQKMAAE FLGTLWLVLG GCGSAVLAAA FPEVGIGLLG VAFAFGLTVL TMAFAIGHIS GCHLNPAVSF GLWAGGRFPA AELLPYIIAQ VAGGIAGAGI LYLIASGEEG FSLAGGFASN GFGEHSPGGY SMLSVMICEV VMTLFFLIII LGATDERAPK GFAPIAIGLG LTLIHLISIP VSNTSVNPAR STGPALFVGD WAVSQLWLFW VAPIVGAILA GFIYRYFRAA E
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