| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal_1053 |
|---|
| Symbol | |
|---|
| ID | 4843509 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS155 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009052 |
|---|
| Strand | + |
|---|
| Start bp | 1213614 |
|---|
| End bp | 1214549 |
|---|
| Gene Length | 936 bp |
|---|
| Protein Length | 311 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 640118277 |
|---|
| Product | riboflavin biosynthesis protein RibF |
|---|
| Protein accession | YP_001049446 |
|---|
| Protein GI | 126173297 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0196] FAD synthase |
|---|
| TIGRFAM ID | [TIGR00083] riboflavin kinase/FMN adenylyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.0005449 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAATTAA TCCGCGGTAT ACATAACATT TTGTCATCCC ACCACGGGTG TGTATTGACT
ATAGGTAATT TTGACGGCGT CCATCGTGGT CATGCACAAG TGATTGCGAA CTTAGTGCAG
AAGGCGAAGC AGTTATCGCT GCCATCTACG TTGATGACGT TTGAACCTCA GCCGCAGGAA
TTATTTAGCG GCGACAATGC GCCAGCTCGT TTAAGTTTAT TACGTGATAA AGTCATGTTG
CTCGATGAAC TTGGGGTTGA ACGGTTAGTG TGTGTTAACT TTAATCGCAC TTTTGCCAAT
CAACCTGCTG AGCATTTTAT TGAAGAATTG TTGGTCCGCA AACTCGGTGT TAAATACCTA
GTGGTCGGCG ATGATTTTTG TTTTGGTCAG GGCCGTAAAG GCAATTTTGA GATGCTTGTG
CAGGCAGGTA TTCAATATGG CTTTACTGTG GTCAGCACCC AAAGTTTTAT GCTGGGCTCG
CAAAGAGTGA GCTCAACCGC CGTGCGTGAA CAATTGGCTA AGGGTAATCT TGAGCAAGCA
AGACGCTTGC TCGGTCACCC TTTTACCTTG AGTGGTCGTG TCGCGCATGG GCAAAAAATT
GGCCGCACCA TTGGTTTTCC CACAGCCAAT ATCGCTTTAA AGCGCAATGT TGTGCCAGTA
CGCGGTGTGT TTGCGGTCAA ATGTTATTGG GATAACAGCG ATATTTATGA GGGCGTAGCC
AATATTGGGT TCCGTCCGAC AGTGAACGGT CAAGTGTGTC AGCTTGAGGT GCATCTTTTT
GATTTTGAAG GTGACATTTA CGGCAAACAT GTTGAGGTCG AGTTGGTGGC TAAACTCCGT
GATGAGCAAC CTTTTGACTC ATTGGATGCG CTAAAACAAC AGATTTTAAA TGATGCAAAT
GAAGCCAGAG CTTTATTTGG TAATGATGCA GGCTGA
|
|---|
| Protein sequence | MELIRGIHNI LSSHHGCVLT IGNFDGVHRG HAQVIANLVQ KAKQLSLPST LMTFEPQPQE
LFSGDNAPAR LSLLRDKVML LDELGVERLV CVNFNRTFAN QPAEHFIEEL LVRKLGVKYL
VVGDDFCFGQ GRKGNFEMLV QAGIQYGFTV VSTQSFMLGS QRVSSTAVRE QLAKGNLEQA
RRLLGHPFTL SGRVAHGQKI GRTIGFPTAN IALKRNVVPV RGVFAVKCYW DNSDIYEGVA
NIGFRPTVNG QVCQLEVHLF DFEGDIYGKH VEVELVAKLR DEQPFDSLDA LKQQILNDAN
EARALFGNDA G
|
|---|
| |