| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal_1044 |
|---|
| Symbol | |
|---|
| ID | 4844354 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS155 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009052 |
|---|
| Strand | - |
|---|
| Start bp | 1201796 |
|---|
| End bp | 1202752 |
|---|
| Gene Length | 957 bp |
|---|
| Protein Length | 318 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 640118268 |
|---|
| Product | transaldolase B |
|---|
| Protein accession | YP_001049437 |
|---|
| Protein GI | 126173288 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0176] Transaldolase |
|---|
| TIGRFAM ID | [TIGR00874] transaldolase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.0000000265536 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCCAATA CATTAGAGCA ACTCAAGTTA TATACCACTA TCGTCGCTGA CACAGGCGAC
ATCGAAGCGA TTAAACGCTA CCAACCTGAA GATGCGACAA CCAATCCATC GCTCATCTTA
AAAGCGGCTC AAATTCCTGA ATACGAATCC CTCATAGATA ACGCTATCGA CTGGGCAAAA
TCACAAAGTG CCAATCTCGC ACAGCAACTT GATGATGCCA GCGACAAGCT CGCCGTTAAT
ATCGGTGTAG AAATACTGAA ACTCGTTCCT GGTCGTATCT CTACTGAAGT TGATGCCCGT
TTATCATTCG ATAAAGAACA ATCAATAGCT AAAGCCCATA AGCTGGTTCG CCTCTACCAA
GAAGCGGGCG TTGATAAGTC ACGCATTCTG ATCAAACTCG CTTCAACTTG GGAAGGCATT
TGTGCAGCTA GAGAGCTGGA GAAAGAAGGT ATCAACTGTA ACTTAACCCT ACTATTTAGC
TTTGCCCAAG CACGTGCTTG TGCCGAAGCG GGGGCATATC TGATTTCGCC TTTTGTTGGC
CGCATTCTTG ATTGGTACAA AAAAGATACC GGTAAAGACT ACGATGCCGT AAATGACCCA
GGTGTTGTTT CTGTTACCGA AATCTATAAT TATTATAAAC AGCATGGTTT TAATACTGTC
GTTATGGGTG CAAGTTTCCG TAATATCGGT GAAATCATCG AGCTAGCAGG CTGCGATCGT
CTCACTATTG GCCCTTCTCT GTTAGAAGAA CTGGCTAATT CTCAAATAGA CATTACTCCT
AAACTGGTTG CAGCAACCAG CACTGTTGCT GCCGAAGCCC CATTGACAGA AGCGCAATTC
CGTTGGGATT TTAACCAAGA TCCAATGGCA GTAGATAAGC TTGCGGAAGG TATTCGAAAC
TTTGCCATAG ACCAAGGCAA ACTCGAAGTG ATGCTCACGG CTAAGCTCGC AAACTAA
|
|---|
| Protein sequence | MANTLEQLKL YTTIVADTGD IEAIKRYQPE DATTNPSLIL KAAQIPEYES LIDNAIDWAK
SQSANLAQQL DDASDKLAVN IGVEILKLVP GRISTEVDAR LSFDKEQSIA KAHKLVRLYQ
EAGVDKSRIL IKLASTWEGI CAARELEKEG INCNLTLLFS FAQARACAEA GAYLISPFVG
RILDWYKKDT GKDYDAVNDP GVVSVTEIYN YYKQHGFNTV VMGASFRNIG EIIELAGCDR
LTIGPSLLEE LANSQIDITP KLVAATSTVA AEAPLTEAQF RWDFNQDPMA VDKLAEGIRN
FAIDQGKLEV MLTAKLAN
|
|---|
| |