Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal_0717 |
Symbol | |
ID | 4842120 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS155 |
Kingdom | Bacteria |
Replicon accession | NC_009052 |
Strand | + |
Start bp | 810353 |
End bp | 811219 |
Gene Length | 867 bp |
Protein Length | 288 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640117939 |
Product | sterol desaturase family protein |
Protein accession | YP_001049114 |
Protein GI | 126172965 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG3000] Sterol desaturase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.390125 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGATATCG CCTCGCTGAT CCAGCACCCC GAAGTGTTAC TGCTCGTGCT CGCGCCGTTG TTTTTCGTGT GTATTTTACT GGAATGGTAT TTTGGCGATA AAAGACAAAA GCTACCGTTA ACTGCACGTT ATCGCGGCCA AGAAGTACTG TGTAATTTCA GCCTTGCGGC CATGCATCAA GGCGCCGATC TACTCACTGG CTTGTTGATC GCTAAGCTGT ATCTGGCGAT GTTTGGTTGG AAATTATTCG ATATTGAAAT GGGCCCATTA AGCTTTATTG CTTTGATGAT CGCGCAGGAC TTTTGTTATT ACTGGTTCCA CAGGGCGAGC CATAGAGTGC GCTGGATGTG GGCGGCTCAC GTGGTGCACC ATAGCTCTGA GAATATGAAT TTTAGCACGG CGTTTCGCCA GAGTTTAATG TATCCGTTTG CGGGCATGTG GGTGTTTTGG TTGCCGCTGG TGGTCATAGG TTTCGACCCA AACTGGGTGG TGTTTGTGGT ATTACTCAAT CTAGGATTGC AATTTTTTGT GCATACCCAA GCGATTAAAT CACTCGGACC GCTGGAATGG GTCTTTAATA CACCGTCTCA TCACAGGGTG CACCACGGTC GTAATCCCCA ATATATAGAT AAAAACTATG CGGGCGTGCT GATTATTTGG GACAAGCTGT TTGGCACTTT TGAGCCCGAA GTGGAGACAG TGATTTACGG TATCACTAAG CCTGTGAATA GTTTTAATCC TCTTAAAGTG ACGTTTAGCG AATGGCGAGA CATGTTTGCT GAGGTCACCG CGACAGGCTT GAGTGTTAAA CAACGACTAC GTATCTTGTT TGCTCCGCCT TCCAGCAGCT TAAAAAGCGA GGAATAA
|
Protein sequence | MDIASLIQHP EVLLLVLAPL FFVCILLEWY FGDKRQKLPL TARYRGQEVL CNFSLAAMHQ GADLLTGLLI AKLYLAMFGW KLFDIEMGPL SFIALMIAQD FCYYWFHRAS HRVRWMWAAH VVHHSSENMN FSTAFRQSLM YPFAGMWVFW LPLVVIGFDP NWVVFVVLLN LGLQFFVHTQ AIKSLGPLEW VFNTPSHHRV HHGRNPQYID KNYAGVLIIW DKLFGTFEPE VETVIYGITK PVNSFNPLKV TFSEWRDMFA EVTATGLSVK QRLRILFAPP SSSLKSEE
|
| |