Gene Sbal_0623 details

Gene Information

• Locus tag: Sbal_0623
• ID: 4842798
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella baltica OS155
• Kingdom: Bacteria
• Replicon accession: NC_009052
• Strand: +
• Start bp: 709472
• End bp: 710128
• Gene Length: 657 bp
• Protein Length: 218 aa
• Translation table: 11
• GC content: 46%
• IMG OID: 640117846
• Product: NAD-dependent epimerase/dehydratase
• Protein accession: YP_001049021
• Protein GI: 126172872
• COG category: [G] Carbohydrate transport and metabolism; [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG0451] Nucleoside-diphosphate-sugar epimerases

Plasmid Coverage information

• Num covering plasmid clones: 32
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGCAAGG TATTCATTGT CGGTGCCGCT GGAAATGTGG GCAGAAGGCT AACACAACAA 
CTCGCACAAC GTGGGCATAC GCTTATGGCA ATGCATCGAC ATCCAGATCA AGCCGATGCC 
ATTCAAGCTG CTGGTGGCGT CTCTGTTTTA GGCGATATCA CCCAAATCAG TGCAACTGAC 
CTCGCAACGT TAATGTCGGG GAACGATGCC ATCGTCTTCA GTGCAGGAGC CGGTGGAAAA 
GGCATACAAC TCACTAATGA TGTGGATGGT AAAGGTCTTG AGCTTGCCGT TGAGGCCGCG 
CAGCTTGCTG GTATTCAACG TTTTATTCTT GTCTCAGTAT TTCCTGACGC GTTAAGAGGC 
GGCTCGGTAT CTGCCAGTTT TGAAAACTAT ATGTTAGTTA AAAAACACGC AGATGTGCAT 
TTAGTTAGCA CAGATTTAGA TTGGGTTATC TTAAGGCCTG GAACCTTATT GGATGAGGTC 
GGGACAGGTA AAGTTAACGC TGCGGTTGCC ATTCCATATG GTAGCGTCTC ACGAGATGAT 
GTGGCTGCAA CGTTAGTTGA ACTGATTGAA CAGCCAAAAG TGAATCGAAT CATCATAGAG 
CTCACTCAAG GTGAAATACC TATTAATGAT GCAATAAGCA GGTTAGTAGC CCAATGA 

 

Protein sequence

MSKVFIVGAA GNVGRRLTQQ LAQRGHTLMA MHRHPDQADA IQAAGGVSVL GDITQISATD 
LATLMSGNDA IVFSAGAGGK GIQLTNDVDG KGLELAVEAA QLAGIQRFIL VSVFPDALRG 
GSVSASFENY MLVKKHADVH LVSTDLDWVI LRPGTLLDEV GTGKVNAAVA IPYGSVSRDD 
VAATLVELIE QPKVNRIIIE LTQGEIPIND AISRLVAQ