Gene Sbal_0580 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal_0580 
Symbol 
ID4841922 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS155 
KingdomBacteria 
Replicon accessionNC_009052 
Strand- 
Start bp654976 
End bp655521 
Gene Length546 bp 
Protein Length181 aa 
Translation table11 
GC content49% 
IMG OID640117803 
Product2'-5' RNA ligase 
Protein accessionYP_001048978 
Protein GI126172829 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1514] 2'-5' RNA ligase 
TIGRFAM ID[TIGR02258] 2'-5' RNA ligase 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAACAAA GGCTATTTCT CGGCTTCGCG CCTACCGCAG CACAAAGGGC AAGGCTGAGT 
GATGTACAGC AGCAACTGTT CTGCCACCTC AATCCTGAGG CGAAAGCGGT TAGCGTCACT 
AATATGCATT TAACGCTCTG CTTTTTAGGG CAAGTGGACG ACGAGCAACG CATCGCCCTT 
CTTGATGCGA TTGACCGCTT AGCTAAGCCT AGATTCAGCG TTCAGCTTAA CCTGCTCGAC 
TTATGGCCCA ATGCCAAAGT CTGTTGCTTG AAAGGCGATG AAGTTGAGCC GCCGTTAGCG 
CAATTAGCTA AGCAGACGCA AGCAATCGCA GGCCGCCTGC AATTGCATAG CAGTGAACAC 
CACTTTTGCC CGCACATCAG TTTATTCAGG AAGGCAAAAC AATGGACGCT AGATGAAGCG 
GCGTTATTGC AACTCAAGGA CATGAATACG CTAACGTTAA CGCCCGAATG TTTGCATTTA 
TATCATTCAA AAAGCACAAG CACGGGTGTG GAATATCACA TCCTACATTC TTGGACGCTC 
GGTTAG
 
Protein sequence
MQQRLFLGFA PTAAQRARLS DVQQQLFCHL NPEAKAVSVT NMHLTLCFLG QVDDEQRIAL 
LDAIDRLAKP RFSVQLNLLD LWPNAKVCCL KGDEVEPPLA QLAKQTQAIA GRLQLHSSEH 
HFCPHISLFR KAKQWTLDEA ALLQLKDMNT LTLTPECLHL YHSKSTSTGV EYHILHSWTL 
G