| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal_0390 |
|---|
| Symbol | |
|---|
| ID | 4841409 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS155 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009052 |
|---|
| Strand | + |
|---|
| Start bp | 434992 |
|---|
| End bp | 436341 |
|---|
| Gene Length | 1350 bp |
|---|
| Protein Length | 449 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 640117605 |
|---|
| Product | aromatic hydrocarbon degradation membrane protein |
|---|
| Protein accession | YP_001048791 |
|---|
| Protein GI | 126172642 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG2067] Long-chain fatty acid transport protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAAAAAC GTCTTCTGAC TTTGGCTGTC ACTGCAGCCT TGTTAAGTTC AACGACTCAA
CTCCATGCCG CAGGTTTTCA ATTAGCCGAA TATTCTGCCA CAGGCTTAGG CCGCGCCTTT
GCGGGTGAAG CGGCTATGGC GGATAACGCT TCGGCTCAAG CACGTAATCC AGCCATGTTG
ACTTATCTCG AAGGTCGTCA GTTATCGACG GGTGGTATTT ATGTCATGCC AAACGTCGAT
GTGACTGGCG ATGTCAGCAT TAGCTCGCCG TTGCTTGGCC CAGATCCTGT TGTTATGAAA
GGTGGCGATG CACTGGATGT GGCCGATGAC GCACTGGTGC CAAATTTTTA CTACTCAAAT
CAGTTAAATG ATCAATGGAC TTGGGGCCTA GCGGTAAATT CTAACTATGG TCTAGCCACT
GAATTACCTG CGACTCACGC CGCGGCTATT TTTGGTAACA AGACTTCGGT TACAACCGTT
GAGTTTAATC CAAACATCGC TTATCGCATC AATGATGCCG TTAGCGTCGG TGCTGGTGTA
CGTATCGTTT ATGGTGAAGG CGAAATTGGT GCGTCATTAC CAGGTTGGGT CGATGGTATC
AAACCTGCTC TGCCTGCTCC CGTGCAGGCT GTGTTACCTC CTGGTGGCAC TGAGCTGAAA
AGCATGAAGG GTGATGATGT GGGTTACGGC TGGCAGTTAG GTGCAAGCTG GCAGATCAAT
CCGGCTCACC GTTTAGGTTT TGCGTATCAC AGCGGCGTGC AATTGGACTT AGATGGTCAT
GCTTCTGGCG TCTTGTATAC CGGCGGTCAA GACGTGTCTA TTGAAGGGTA TTTACCGCTT
GAATTACCCG CCTTTGCAGA AATTGCTTCC CACCACCAAT TGACCGATAA CTGGGCCATG
CACGCGAGCG TGAACTGGAC CGATTGGAGT GTATTTGATC AGCTGGTGGC TTATTTCCCT
GGTGACGTTA AACCTAAGGG CGATTTAGAG TCTGATTTAG TTAAAGAAGA ACACTTTGAA
GATAACTGGC GTTTCGCGCT GGGAACCACT TATCAAGTGA ATAATGACTG GTTAGTGCGT
GCCGGTGTTG CTTTAGACAA AACGGCAGCA AATGACGAGT GGCGCACAAC TACAATTCCA
GACTCTGACC GTCTGTGGTT CTCTGTCGGT GCCGGTTATC AGGCGACTAA GAATCTGAAT
GTTGATTTTG CGGTGACGTA TATCAAAGCA ACAGGCGATG CGCCAATCAA CGAACAGCAA
AATCTACTGG GCTTAGCGGC CGTTAACTTT AACGGTGAAG CGAGCGGCGA TGTGTGGCTT
GCGGGTATCC AGATGAGCTA TAAGATGTAA
|
|---|
| Protein sequence | MQKRLLTLAV TAALLSSTTQ LHAAGFQLAE YSATGLGRAF AGEAAMADNA SAQARNPAML
TYLEGRQLST GGIYVMPNVD VTGDVSISSP LLGPDPVVMK GGDALDVADD ALVPNFYYSN
QLNDQWTWGL AVNSNYGLAT ELPATHAAAI FGNKTSVTTV EFNPNIAYRI NDAVSVGAGV
RIVYGEGEIG ASLPGWVDGI KPALPAPVQA VLPPGGTELK SMKGDDVGYG WQLGASWQIN
PAHRLGFAYH SGVQLDLDGH ASGVLYTGGQ DVSIEGYLPL ELPAFAEIAS HHQLTDNWAM
HASVNWTDWS VFDQLVAYFP GDVKPKGDLE SDLVKEEHFE DNWRFALGTT YQVNNDWLVR
AGVALDKTAA NDEWRTTTIP DSDRLWFSVG AGYQATKNLN VDFAVTYIKA TGDAPINEQQ
NLLGLAAVNF NGEASGDVWL AGIQMSYKM
|
|---|
| |