| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal_0183 |
|---|
| Symbol | |
|---|
| ID | 4841805 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS155 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009052 |
|---|
| Strand | + |
|---|
| Start bp | 209254 |
|---|
| End bp | 210195 |
|---|
| Gene Length | 942 bp |
|---|
| Protein Length | 313 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 640117396 |
|---|
| Product | polysulphide reductase, NrfD |
|---|
| Protein accession | YP_001048586 |
|---|
| Protein GI | 126172437 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG3301] Formate-dependent nitrite reductase, membrane component |
|---|
| TIGRFAM ID | [TIGR03148] cytochrome c nitrite reductase, NrfD subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTGCCC TACATTTTGA TACCTTAGTT TGGCATTGGC CGATTGCGAT CTACCTGTTT
TTGGCGGGTG TATCAGCAGG GGCTATGTTC TTCGCCGTAC TGTTGAAACA TTTTGTTTTG
AAGCAAAACG CCTATCAGTC TGGCTTTGTG CGAGCCGCCT GTATTGTCGC CCCTGTCGCC
GTGATGGCAG GCTTAGGCAT ATTGGTTGCA GACTTAACTA AACCCCTCGA TTTTTGGAAG
ATTTTGGTGT TTTACAATCC TAAATCTGTG ATGTCGATGG GTGTGCTTAT TCTGCTGATT
TACCAAGTGT TTATGTTTAT GTGGATTGGG TTAACTTTCC GCAAACCTGT CGATGCTTGG
TGTGAATCGC GCTTTCCTAT CGTCCTTAAA CTGACGGCTT TGCTAGCTCG GTTTGAGGCG
ACGATTACGG GGTTACTGGT GATTCTATCC TTAGCATTGG GCGCGTATAC CGGCTTTTTG
TTATCGGCGT TACCTGGTTA TCCCATGCTG AAAAATCCTG TGCTGCCTTT ACTGTTCTTG
GCATCAGGGC TGTCTTCCGG TGCGGCATCT TCTTTACTCG GTGGCGTGTT GATGAATGGC
AAACCGAATG ACAAAGAGGT GCACTTTATC CACAAGGTGG AAATCCCGCT GATCTTAGTT
GAGATTGTGC TGCTGTTTAC CTTCTTCGTT GGCTTATTAC TCACCGGAGG ACAGAGTAAA
ATTGCCGCCT TTAATGCCTT AGGTTATGGC TTCTGGGGCT GGATTTTTTG GGTAGGGATT
ATCGGACTCG GTTTATCAGG ACCCTTAGCG ATGAACCTGT TTATGACCAC GACGTCGAAA
CGCAAATGGG CTTATGTAGC AGGGACGGCT TGCTTGAGCT TAATCGGGGT GTTATTGCTG
CGTAACTTCA TACTGTACAC AGGACAAATG ACGATCGCTT AA
|
|---|
| Protein sequence | MSALHFDTLV WHWPIAIYLF LAGVSAGAMF FAVLLKHFVL KQNAYQSGFV RAACIVAPVA
VMAGLGILVA DLTKPLDFWK ILVFYNPKSV MSMGVLILLI YQVFMFMWIG LTFRKPVDAW
CESRFPIVLK LTALLARFEA TITGLLVILS LALGAYTGFL LSALPGYPML KNPVLPLLFL
ASGLSSGAAS SLLGGVLMNG KPNDKEVHFI HKVEIPLILV EIVLLFTFFV GLLLTGGQSK
IAAFNALGYG FWGWIFWVGI IGLGLSGPLA MNLFMTTTSK RKWAYVAGTA CLSLIGVLLL
RNFILYTGQM TIA
|
|---|
| |