Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal_0112 |
Symbol | |
ID | 4842764 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS155 |
Kingdom | Bacteria |
Replicon accession | NC_009052 |
Strand | - |
Start bp | 127143 |
End bp | 128192 |
Gene Length | 1050 bp |
Protein Length | 349 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 640117326 |
Product | RND family efflux transporter MFP subunit |
Protein accession | YP_001048516 |
Protein GI | 126172367 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0845] Membrane-fusion protein |
TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCGGTATT TAATGATAGG TTTATACCTG CTGTGTTTTG CAGTCCACGC AAGCGCAGTA CCTGTAACAG TCGCTTTGCC CCAAACAGGC AGCACCAATG AACTGTTGCC ACTCAGTGGC TCCATTAAAT CCGCACGGGT GGCTCGCTTA TCGGCACGTA CCGATGGCCT CGTCGCCAAA GTGCTGGTCG ATGCGGGCTC CCAAGTCCGC GCAGGCCAGC CTTTACTCGC ACTCGACGAT ACCTTAGCCG TACATCAATT AGCACAGCGT CAAGCCGATG TAATAGCCGT TAAGACCATG CTGGCAGAAA AGCAGCGACT CCTCACCGAG GCGCAAACAC TCAGCGCTCA GCAGTTATTC CCCGAAACAG AGCGCGCGAT TCGCCAAGCG GCGTTAACCG AGGCCGAAGC CAATCTGCAG AGTTTAACGG CTGCACTCGC ACACCAAAAA GAGGTGGTCG CCCGCCACCA ACTGATGGCA CCGTTTGCGG GGGTGATTTC CAGCAAACAA ACTGAAACCG GTGAGTGGGT TAATGTTGGC ACAGAAATCT TCACCTTAGT ATCCCAAGAA CAGCTCTGGC TCGACATTCA AGTGCCACAG GAAATGTTCC AAAGCGTAGC CACTGCGACT CACGTGGACA TTGCCGCCGA CATGCTGCCT GAACAACAGT TTATCGGCCA TGTGAATGCC CTTGTCCCTG TGAGCGACCA CAATGCTCGC AGCTTCTTGG TACGCTTGAC CATTCCCGAG GCAGATGGAC TTTTAATGCC CGGCACATCA GCCACTGCGA CCTTCCACTT ACAGCGAGCG CAACACAGTG TTGTCGTGCC GCAGGATGCC CTCATCCGTC ACCCCGACGG CCAGTTCAGC GTCTTTACCG TGCAAAACAA CATAGCCCAA CGGCATACCG TTCAAGTGGG CCATACGAGC GCCATCGGGA TTGAAATCCT CAGTCCATTA CCCAAAGACG CGCCCGTGGT GATCCGCGGT AACGAGAGTT TACAAGACCA ACAGTCAGTC TCTGTGCTCA ACTCTGTCAT AGGAGGTTAG
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Protein sequence | MRYLMIGLYL LCFAVHASAV PVTVALPQTG STNELLPLSG SIKSARVARL SARTDGLVAK VLVDAGSQVR AGQPLLALDD TLAVHQLAQR QADVIAVKTM LAEKQRLLTE AQTLSAQQLF PETERAIRQA ALTEAEANLQ SLTAALAHQK EVVARHQLMA PFAGVISSKQ TETGEWVNVG TEIFTLVSQE QLWLDIQVPQ EMFQSVATAT HVDIAADMLP EQQFIGHVNA LVPVSDHNAR SFLVRLTIPE ADGLLMPGTS ATATFHLQRA QHSVVVPQDA LIRHPDGQFS VFTVQNNIAQ RHTVQVGHTS AIGIEILSPL PKDAPVVIRG NESLQDQQSV SVLNSVIGG
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