Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal_0043 |
Symbol | |
ID | 4842351 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS155 |
Kingdom | Bacteria |
Replicon accession | NC_009052 |
Strand | + |
Start bp | 49791 |
End bp | 52241 |
Gene Length | 2451 bp |
Protein Length | 816 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640117258 |
Product | diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) |
Protein accession | YP_001048448 |
Protein GI | 126172299 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2200] FOG: EAL domain |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTTCGTA AGCTTTCGCT CGCGGTACTG CTCCCTCTGT GTATGCTGAC ACTATATTTA GTGTTGGTCA TAGGCGAGTA CCTGTTTGAA AGCGATCAAG TGCGTGCTGA ATTGGCGCAG CGACAATCGA CACTGATAAA GCAGCAGTTG TTCCGGATGC AGAATGTGGT TCAATCGGCG CAGGCTTTAC AGGATGTGGA GCGGATCGAG CAGGAGGTTT CCTTAGCTGC GCTGGATATG GGCACTATGG TTTATATCTT AGTTGATGCT GATAGCCGTA TTCGTTTTGC AAACCATACT GTTTGGCGCG ATAGCAATGC CATGCAAGTC ATTGATGGTT ATGATGCTAC TCGTGATCGT GCTGTGGTTC AGGCTTTCCT GCCACAAATT CTTGTTAATC TCGAACGCTT AACCATTCAA GCATATTATC CCGTCTTGCC TCAGTATGGT GGTGCGGTTG ATTTGATTTA TCTTGAAGCC GATTTAGCGC CTTTAGTCGC CGAAGCTTCC GCTAAGTTAC AACAACGTTT TATGCGGGTT TGGGGGCTGG GTGGATTATT ACTGATTGGT TTTACCTTCA TTCTCTATTT CCTATTGATC CGTCCATTCC AAATATTAAG CGAGGCCGCT AAACAGGTAG GGACTTCTTC CTTTTCGACA TCGATCCCAT GGAGCTCATC AGAAGTCTTA TCATTGCAAG CCAGTTTGCA GCAGGTACAT GAACGTTTGA GTCGTGCCGT GAAACAGTTG AATGACAGCG AACTGCGCTG GCTGTTTGCG GTGGAAGGCT CGCGGAACGG TATTTGGGAT TGGGATATCA GTACGGGTGA GGTTTTTCTG TCTGATCGCT GGAAAGAGAT GATCGGTTAT GCACCGGATG AATTAGCGGG CGTATTCCAG ACTTGGGAAG CGCGGTTACA TCCCGATGAT AGGGATATCG TACTGGATGC TTTGCAGGAG TACGTTAGCG GTAAGAGTAA AGAATTTGAA AGTGTCCATC GACTGCGGCA TAGAGAGGGG CATTATGTGT GGGTGCTGGA TCGCGGCATG TTGGTTGATT GGGACCCTCA AGGACGTCCG ACTCGGATGA TCGGCATTCA TATGGATGTG TCAGAAAGTG CCAAAAACCA TGCTGCGATT AATGAACTTG TGGATCAATC GGTTACGGGT CGCAAGATGT TACCCGATGT CTTTATGGCG CGACTGTCGC AATTTTTAAC CCAAGGTAAT AGTTCAGGTC AATGGGGATC ATTGCTGCTT GTTGAGGTGG ATAGGTTAGG CTTGGTCGCA ACTTTAAACT CTCACGAATT AGAGCGTTTA CTCACGCAAG TGGCTGCACG TCTATCGAGT TATTTTACTG AGAATATTAC CGTTGGCCGA TTGGAGTCCG GTGATTTTGT TTTGCTGGCT AAAGACTTAG CGATTGATGC TTCAGTGGCT GCGCGTCGTG CTTTAGCGCT TGCGAGTGAG TTAAGGCAAG TGATTGCTCG ACCATTCCAT TACGGTCATC ATCACTTTGA GCTCAGCGCG AATGTGGGGA TTTGTTTGCT CGACAGCATA GAGACCTTAG ATCCAGCTTT AGTCATGCGC CGCGCCGAGC TAGCAACCTT GAGTGCTAAG CGACCTGGGC AAGCGGGATG CGCTTTCTAT CATGCTGAGA TGGATTTACG TCAGAGCCGT GATGAACAGT TACAACAGGA ATTACAGACA GCATTACAGC AAGATAGCAT GACGTTAATG TTCCAACCTG TGATGAATGC GCACAGTGAA CTGGTCTCGG CTGAAGTGCT CACACGTTGG TATCGTACCG ATGGCGAGTT TATCCCGCCT GCAGAGTTTG TAGCGTTAGC CGAACAGGGA GGAATGATTG CTGAACTCGA TTTTTGGGTC GCTAATCGTG TGTGTCAGTT TATTCAGACA TCCCATGCCC AAGGCTGGAG TTTGCCGACT TTAACTCTTA ATATCAGTGC ATTCTCATTT GGGCAGGCAG ATTTTGTTGA TGCATTGATT GCGTTAGTCA AAGAGCATGG CATTGCGCCT CATCAATTGG GTATTGAGCT CAATGAGGCT GCATTGTTAA TGCAACCACA GTTTGTGGCT GAGCGCGTGT CTAAGTTAGT TGATGCTGGG ATAGGCATCG TCCTCGATCA TTTCGGTTCT GGATCGAGTG CTTTGAGTTG TTTAGCCAAC CAGCCATTAG TTGCGGTTAA ATTGGATATG AGTTGTATTG ATTCATTAGC CGCAATGCCA CAAAGAGTGA AGGCGTTAAT TGTCTCTGCG CAGCAGTTTA ATTTGCACGT GGTGGCTAAA GGCGTTGAAT CACCCCAACA CTATCAAGCC TTTGTTGAAT TTGGCTGTGA TGGTTATCAG GGCTATTTAT TCAGCCGAGC GCTAAACCAA GCGGACTTTA TCCAGCTTGT TTGTCCTCGT CCTTTATTGC GAAGCGTTTA A
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Protein sequence | MLRKLSLAVL LPLCMLTLYL VLVIGEYLFE SDQVRAELAQ RQSTLIKQQL FRMQNVVQSA QALQDVERIE QEVSLAALDM GTMVYILVDA DSRIRFANHT VWRDSNAMQV IDGYDATRDR AVVQAFLPQI LVNLERLTIQ AYYPVLPQYG GAVDLIYLEA DLAPLVAEAS AKLQQRFMRV WGLGGLLLIG FTFILYFLLI RPFQILSEAA KQVGTSSFST SIPWSSSEVL SLQASLQQVH ERLSRAVKQL NDSELRWLFA VEGSRNGIWD WDISTGEVFL SDRWKEMIGY APDELAGVFQ TWEARLHPDD RDIVLDALQE YVSGKSKEFE SVHRLRHREG HYVWVLDRGM LVDWDPQGRP TRMIGIHMDV SESAKNHAAI NELVDQSVTG RKMLPDVFMA RLSQFLTQGN SSGQWGSLLL VEVDRLGLVA TLNSHELERL LTQVAARLSS YFTENITVGR LESGDFVLLA KDLAIDASVA ARRALALASE LRQVIARPFH YGHHHFELSA NVGICLLDSI ETLDPALVMR RAELATLSAK RPGQAGCAFY HAEMDLRQSR DEQLQQELQT ALQQDSMTLM FQPVMNAHSE LVSAEVLTRW YRTDGEFIPP AEFVALAEQG GMIAELDFWV ANRVCQFIQT SHAQGWSLPT LTLNISAFSF GQADFVDALI ALVKEHGIAP HQLGIELNEA ALLMQPQFVA ERVSKLVDAG IGIVLDHFGS GSSALSCLAN QPLVAVKLDM SCIDSLAAMP QRVKALIVSA QQFNLHVVAK GVESPQHYQA FVEFGCDGYQ GYLFSRALNQ ADFIQLVCPR PLLRSV
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