| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal_0038 |
|---|
| Symbol | |
|---|
| ID | 4842128 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS155 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009052 |
|---|
| Strand | + |
|---|
| Start bp | 40542 |
|---|
| End bp | 41450 |
|---|
| Gene Length | 909 bp |
|---|
| Protein Length | 302 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 640117250 |
|---|
| Product | coproporphyrinogen III oxidase |
|---|
| Protein accession | YP_001048443 |
|---|
| Protein GI | 126172294 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0408] Coproporphyrinogen III oxidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.893663 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTGTGC CTGATGCTGC AGTGGTAAAA GCGTTTTTAC TCGATTTACA AAACCGAATT
TGTGCCGGTT TACAGGCTCT GGATGGCCAA GCAAGGTTTG CAGCCGATTC ATGGACCCGC
GCCGAAGGCG GTGGTGGCAC GAGCCGAGTA TTAACCCAAG GTGCAGTATT CGAGCAAGCT
GGAGTTAACT TTTCCCATGT GACTGGCGCC GCTATGCCGG CGTCGGCAAC GGCGCATCGC
CCAGAATTGG CGGGTCGCAG TTTTGAAGCT ATGGGTGTGT CTTTAGTGAT CCATCCTAAC
AATCCGTATA TCCCGACGAC TCACGCCAAT GTGCGCTTCT TCATCGCCCA AAAAGAGGGT
GCTGATCCTG TGTGGTGGTT TGGCGGTGGT TTTGACTTAA CGCCTTATTA TCCATTTGAG
GAAGATGTGC GTGAGTGGCA TCAAACGTCT AAGGATATTT GTGCGCCTTT CGGGGATGAG
GTTTATCCCA AGTATAAGAA ATGGTGCGAT GAGTATTTCT TCCTGCCGCA TCGTAATGAA
ACCCGCGGCG TGGGCGGACT GTTTTTCGAT GACTTGAATC AAGCAGGATT CGAGCAAAGC
TTTAGCTTTA TGCAAGCCGT GGGCAATGGC TTCTTAACGG CCTATGCACC GATTGTTGAG
CGTCGTAAGG ATACTGAATT CGGTGAGCGT GAGCGTCAGT TCCAACTCTA TCGCCGTGGT
CGTTATGTTG AGTTCAACTT AGTCTATGAC AGAGGCACGC TGTTTGGTCT GCAGACAGGT
GGTCGTACCG AGTCTATCTT AATGTCGATG CCGCCATTAG TGCGTTGGCA ATATGCTTAT
ACGCCAGAGG CGGGAAGCCC AGAGGCAGAT TTGTACGATA ACTACCTCAA ACCACGCGAC
TGGGTTTAG
|
|---|
| Protein sequence | MSVPDAAVVK AFLLDLQNRI CAGLQALDGQ ARFAADSWTR AEGGGGTSRV LTQGAVFEQA
GVNFSHVTGA AMPASATAHR PELAGRSFEA MGVSLVIHPN NPYIPTTHAN VRFFIAQKEG
ADPVWWFGGG FDLTPYYPFE EDVREWHQTS KDICAPFGDE VYPKYKKWCD EYFFLPHRNE
TRGVGGLFFD DLNQAGFEQS FSFMQAVGNG FLTAYAPIVE RRKDTEFGER ERQFQLYRRG
RYVEFNLVYD RGTLFGLQTG GRTESILMSM PPLVRWQYAY TPEAGSPEAD LYDNYLKPRD
WV
|
|---|
| |