Gene Sbal_0003 details

Gene Information

• Locus tag: Sbal_0003
• Symbol: recF
• ID: 4843454
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella baltica OS155
• Kingdom: Bacteria
• Replicon accession: NC_009052
• Strand: +
• Start bp: 2751
• End bp: 3833
• Gene Length: 1083 bp
• Protein Length: 360 aa
• Translation table: 11
• GC content: 45%
• IMG OID: 640117216
• Product: recombination protein F
• Protein accession: YP_001048409
• Protein GI: 126172260
• COG category: [L] Replication, recombination and repair
• COG ID: [COG1195] Recombinational DNA repair ATPase (RecF pathway)
• TIGRFAM ID: [TIGR00611] recF protein

Plasmid Coverage information

• Num covering plasmid clones: 13
• Plasmid unclonability p-value: 0.133569
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGCCTGA CCCGTCTCAA TATCGAAGCA TTTCGCAACA TTCAGTCCGC ACAGTTAATC 
CCTGCACCTG GGATTAACTT GATTTATGGC CAAAATGGCA GCGGTAAAAC CAGTATTCTT 
GAGGCGATTT ATTTCCTCGG TATGGGACGT TCGTTTCGCA GCCATTTATC CCAACGAGTG 
ATTAATAACG ACGACGATAA GTTAACACTC TTTGCGACCT TAAATTTAGC GCGCGGTGAC 
AGCAAAATCG GTTTGCGCCG ATTTCGTAGT GGTGAGACCG AAGTGAGAAT CGACGGCGAA 
AAAGTCAAAC GTCTGTCGAC ATTAGCCGAA ACGTTACCTA TTCAAGTGAT CACGCCTGAA 
AGCTTTTCTT TACTGTTTGA AGGCCCAAAA TCCCGTCGAC AATTTATCGA TTGGGGCGCA 
TTTCATGCTG ACCCACAGTT TTATGGCGCT TGGACGAATG TTCGTCGAGT TCTTAAGCAA 
AGAAATCAAT TGCTTAGAAA TGGTTCGGCC TACAGTAATA TTCAATTTTG GGACCAAGAG 
TTTGTGCGTT ATGCCGAGCA GGTTACTGAA ATACGAAACC ATTATGTAGA CTCGTTAAAT 
GAGCTACTTA AGGGTATAAT CGGGGAGTTT TTACCGAGTG TAGATGTGAA GGTTTCATTT 
ACGCGCGGCT GGGATAGTAA AACGGATTTT GCAGAACTAC TCGAAAACCA ATATTCCAGA 
GATTTGGCCA CAGGTCATAC CGTCAGCGGT CCCCATAAAG CTGACCTTAG ACTTCGTGTA 
GGCACTTTGC CGGCGCAGGA TGCCCTGTCC CGTGGTCAAT TAAAATTATT AGTCTGTGCA 
CTGCGTATTG CACAGGGAAA GTTGCTCAAA CAACAAATAG ATAAACACAG TATTTATCTT 
GTGGATGATC TTCCGTCCGA GTTGGATGCA CAGCATAGGC AGCTATTGCT TAAGCAGTTA 
ACGGATACTG GAGCACAAGT TTTTGTGACC GCCATCGATC CTGCTGCAAT AGTCGATTCG 
TTACACACGC CTCCCAGTAG GATGTTTCAT GTGGAACAGG GACGTGTAAC GGTAATTGAA 
TAA 

 

Protein sequence

MSLTRLNIEA FRNIQSAQLI PAPGINLIYG QNGSGKTSIL EAIYFLGMGR SFRSHLSQRV 
INNDDDKLTL FATLNLARGD SKIGLRRFRS GETEVRIDGE KVKRLSTLAE TLPIQVITPE 
SFSLLFEGPK SRRQFIDWGA FHADPQFYGA WTNVRRVLKQ RNQLLRNGSA YSNIQFWDQE 
FVRYAEQVTE IRNHYVDSLN ELLKGIIGEF LPSVDVKVSF TRGWDSKTDF AELLENQYSR 
DLATGHTVSG PHKADLRLRV GTLPAQDALS RGQLKLLVCA LRIAQGKLLK QQIDKHSIYL 
VDDLPSELDA QHRQLLLKQL TDTGAQVFVT AIDPAAIVDS LHTPPSRMFH VEQGRVTVIE