| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_4506 |
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| Symbol | |
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| ID | 7090251 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS223 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011665 |
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| Strand | + |
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| Start bp | 27496 |
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| End bp | 28233 |
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| Gene Length | 738 bp |
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| Protein Length | 245 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 643463310 |
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| Product | type-F conjugative transfer system pilin assembly protein TrbC |
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| Protein accession | YP_002360322 |
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| Protein GI | 217975723 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR02742] type-F conjugative transfer system pilin assembly protein TrbC |
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Plasmid Coverage information |
| Num covering plasmid clones | 127 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 85 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAAAAGT TTGAGACCAA ATTACCAACA ATTTATACCG AGTTATGCAC AAAAATTGTG
CATAACTCTC TATTTCCACA ATCATTCAAG GGATTAGCCT TACTGCTGAG CTTATACCTT
GGATCAATTT CACCGGTATT CGCCCAAACG GATTACAGTA TTGACGAATT AACAGCGCTG
TCGATGCGAG AACGCCATAC ATTACCACCG CTGAACCTCG ATCAAACCGC GCTGTTTGAT
AAAGCCCGCC AGTTCGAAGC GCAAAGCAAA GGCCAATTAG ACAACGCACT ATCACCGTTG
CTCGATGCCA AGCCCAACCC CAGCGCCGAT GCTAATGGTG TGATGGTATT TGTGTCGTTG
GGTATGCCTG CGACCAGTTT GCAGCAGTTA CTCATGCAAA GCGCAGACTT ACAGGTGCCA
CTCATTGTGC GCGGTGTACT GCCTCAAGGC TTTACCGCCA CCGTTAAACA GATGAATCAC
CTTATCGATA ACAAGGGTAA AACCATACAG AGCGGTTTTG CGATTAATCC CCAGTGGTTT
ACGCAATTCG GCATTACCCA AGTACCCGCC TTTGTTGCGG TAAGACCCAA CAAATGTCAG
GCAAAACAGC CCTGCAGCAG CGATGACTTT GACGTGATTT ACGGCAACGT TTCGTTGTAT
GACGCGCTGA ACTTATTGGC ACAACACGGC AGCATTCCCG ATGTGGCAGC GAAGACATTA
GCAAAGGGGG CGAAATGA
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| Protein sequence | MKKFETKLPT IYTELCTKIV HNSLFPQSFK GLALLLSLYL GSISPVFAQT DYSIDELTAL
SMRERHTLPP LNLDQTALFD KARQFEAQSK GQLDNALSPL LDAKPNPSAD ANGVMVFVSL
GMPATSLQQL LMQSADLQVP LIVRGVLPQG FTATVKQMNH LIDNKGKTIQ SGFAINPQWF
TQFGITQVPA FVAVRPNKCQ AKQPCSSDDF DVIYGNVSLY DALNLLAQHG SIPDVAAKTL
AKGAK
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