Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal223_4442 |
Symbol | |
ID | 7094361 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS223 |
Kingdom | Bacteria |
Replicon accession | NC_011668 |
Strand | - |
Start bp | 29969 |
End bp | 30535 |
Gene Length | 567 bp |
Protein Length | 188 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 643467307 |
Product | type IV conjugative transfer system protein TraE |
Protein accession | YP_002364265 |
Protein GI | 217980289 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR02761] type IV conjugative transfer system protein TraE |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 97 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 91 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTTACAAA AGAACAAGAT CGACTTTATT CGCATTGCAA AATCCCTCAA CACACTTCTG TTAATCGGCT TTACCGTAGC CATGATCAGT AACACTGTCC TAGCAAGTAT TGTATGGAAG GCCTACTTCA ATAAAAGCCG CACCGTTGTA CCACCGACCA TCAGCGCAGC CTTTACCGTA TCAGACACAT CTATAGACGA ACCGTATTTA CAGCAAATGG CCGAATACTT TGCCTTTCTA AAGCTCAATG TCACGCCCGC TTCGGTAGAC CATCAGTACA AACAGCTCGC GAGCTATATC GATGAAGCTG ATTGGCATCA GATGCAACCT TTACTGGTTG AAGATGCCGC CATGATTAAA AAACAAAACA TCAGCAGTCA CTTCACCATC AATGAAACCC AAATTGCCCT TGATGATCGT CTCGTCAAAC TCACAGGCAC GTTAAACAAA TATGTGGGCA AACGCGCGCT AGAACCCGAA ACCATTAGCT ACATCATTGC CATGAATTAT GACCATGGCC AACTGTCGCT CAAAGCCATT AAGAAAGTGC AAAAGGACGT TAAATAA
|
Protein sequence | MLQKNKIDFI RIAKSLNTLL LIGFTVAMIS NTVLASIVWK AYFNKSRTVV PPTISAAFTV SDTSIDEPYL QQMAEYFAFL KLNVTPASVD HQYKQLASYI DEADWHQMQP LLVEDAAMIK KQNISSHFTI NETQIALDDR LVKLTGTLNK YVGKRALEPE TISYIIAMNY DHGQLSLKAI KKVQKDVK
|
| |